Shewanella khirikhana: STH12_04066
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Entry
STH12_04066 CDS
T06711
Symbol
epsF_2
Name
(GenBank) Type II secretion system protein F
KO
K02653
type IV pilus assembly protein PilC
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
skh02044
]
STH12_04066 (epsF_2)
02035 Bacterial motility proteins [BR:
skh02035
]
STH12_04066 (epsF_2)
Secretion system [BR:
skh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
STH12_04066 (epsF_2)
Bacterial motility proteins [BR:
skh02035
]
Pilus system
Pilus assembly proteins
STH12_04066 (epsF_2)
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF1673
Motif
Other DBs
NCBI-ProteinID:
AZQ13092
LinkDB
All DBs
Position
complement(4601749..4603008)
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AA seq
419 aa
AA seq
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MATVAATKSKKAASKQQPKVYNFEWKGLNRDGKKSSGELRGTSVAEIKTILKNQGINPKL
VRKKSEGLFGKGNKKINAMDIAMITRQIATMLMAGVPLVTTIDILGKGHEKPKMRELLGT
ILNDIQAGIPLSDALRPHRIYFDDLYVDLVAAGEHSGSLDVVFDRIATYREKAEALKSKI
KKAMFYPAAVVVVAIAVTTLLLLFVVPQFEDIFKSFGAELPAFTQMIINISRFLQSSWYF
FLTAIVASVWLYIRAHRNSQVVRDRQDEFVLKIPVIGDILHKAAMARFARTLATTFAAGV
PLIDGLESAAGASGNAVYRKALLKIRTEVMAGMQMNVAMRTVNLFPDMLIQMVMIGEESG
SLDNMLNKIANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNVVG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgtggccgcgaccaagtcaaaaaaagccgcctcaaaacagcagcccaaagtg
tataactttgaatggaaaggcttaaaccgtgacggtaaaaagtccagtggcgagctgaga
gggacatcggttgccgaaattaaaactattctgaagaatcagggcattaatccaaaatta
gttcgaaaaaaatctgagggtctcttcggaaaaggcaataaaaaaatcaatgcgatggat
atcgctatgatcacccgtcaaatagcaaccatgttaatggcaggcgtccctttagtgacg
accatcgatattttaggaaaagggcatgaaaagcctaaaatgagagaacttttaggtact
atcttaaatgatatccaagctggtattcctctctccgatgctctaagacctcaccgtatc
tattttgatgatctctatgttgacttggtagcagcaggtgagcattctggttctctggat
gtggtattcgaccgcattgccacatatagagaaaaagcagaggcactaaaatcaaaaatt
aagaaagctatgttctaccccgccgcagttgtggtagtagccattgcggtaacaacccta
ctgctacttttcgtagtaccgcaatttgaagatatttttaagagttttggtgcagaactt
ccagcattcacccaaatgatcattaatatctcgaggttcctgcaatcatcttggtatttc
ttcctcaccgcgattgttgcgtcagtctggctctacataagggcacacagaaactctcaa
gttgtaagggatcggcaagacgagtttgtgttaaagatacctgtaatcggagatatttta
cataaagctgccatggctcgttttgcccgcactttggccaccacctttgctgctggcgtg
cccctcattgatggcttggaatctgcggctggtgcttctggtaacgcagtttaccgtaaa
gcgctcttaaaaattcgcaccgaggtaatggccggtatgcaaatgaacgtcgctatgcgc
acggtaaaccttttcccagacatgctgattcagatggtaatgattggtgaagagtcaggc
tctctcgataatatgctcaataaaattgccaacatttatgaaatgcaagtagatgatgcc
gtcgatggtttgtccagtctaatcgaacccattatgatggttgtaattggcaccttggtt
ggtggattgatcgtaggcatgtacctgccaatcttccagatgggtaacgtggtaggataa
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