Shewanella khirikhana: STH12_04067
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Entry
STH12_04067 CDS
T06711
Symbol
xpsE
Name
(GenBank) Type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
skh02044
]
STH12_04067 (xpsE)
02035 Bacterial motility proteins [BR:
skh02035
]
STH12_04067 (xpsE)
Secretion system [BR:
skh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
STH12_04067 (xpsE)
Bacterial motility proteins [BR:
skh02035
]
Pilus system
Pilus assembly proteins
STH12_04067 (xpsE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_14
AAA_7
AAA_29
XOO_2897-deam
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZQ13093
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Position
complement(4603043..4604749)
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AA seq
568 aa
AA seq
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MPTTGLHLGLSTLFIRKKLLTEEQLSEAVALSRKNRHSLVTTLVASKLLSAREIAELCYE
EYGTPLLDLVEFDIKSIPEEFLNRKLIEKHRCLPLFKRGNRLYIGTSDPTNIAALEDFQF
SAGLHAEAILVEDDKLVAALEKILEEDISALDLSGIDEDSLAGIEVADTDKRPENDNEGA
DDAPIVIYINKILTDAIRRGASDLHFEPYEKRYRIRFRIDGILHEVSEPPINLSGRISAR
LKVMSKLDIAERRLPQDGRIKMKLSRTKSIDFRVSTLPTLWGEKIVMRILDSSSAQLGIE
KLGYEPDQKQLYLDNLAKPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEI
NLEGVNQVHINNKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLST
LHTNSAAETLTRLLNMGVPGYNIASSVNLIIAQRLARRLCPECKQPEEIPQHELERLGFS
PEQISEGFTVFKPCGCDLCSGGYKGRVGIYEVMPMSDEIARVIMEGGNSLEIARMAKTQG
IRDLRQSGLLKVVQGVTSITEVNRVTSF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgccaactactggtctccacttaggattatcgacgctatttatccgtaagaagctactc
acagaggagcaactgtcggaggccgtcgcactttcgcgtaaaaacaggcattcgctggtc
accaccttggtggccagcaaattactgtcggcgagggaaattgctgaactgtgctacgag
gagtatggaactccactactggatttagtcgaatttgatattaagagcatccctgaggaa
ttccttaatcgcaaattaatcgaaaaacaccgttgcttaccactgtttaagcgtggtaat
aggctgtatataggcacatctgacccaaccaatattgccgccctcgaagactttcagttt
tccgcaggcctgcatgctgaagcaatattggtggaagatgacaaactagttgcagccctt
gagaaaatcctcgaagaggacattagtgcgctggacttaagtgggattgacgaggactca
ctagctggcattgaggttgctgatactgataaacgccccgagaatgacaacgaaggtgca
gatgatgcccctatcgtaatttacattaataaaatcctaacagatgccattaggcgtggt
gcatcagatttgcactttgagccctatgaaaagcgctatcgcattcgctttcgtattgat
gggatccttcatgaagtttctgagccaccgataaacctttcgggtcgtatatccgcccga
ctaaaggtaatgtcaaaactggatattgctgagagacggctgcctcaggacggccgtatc
aagatgaaactcagtcgtaccaagagcatcgatttccgtgtaagcaccctacctacgctc
tggggcgaaaaaattgtaatgcgtattctggactcatcctctgcccaactcggcattgag
aagctggggtatgagccagaccaaaagcaactctatctggacaatctagccaaacctcag
ggtatgattttggtaaccggccccaccggctcgggtaaaaccgtatccctctacacgggt
cttaatatcctcaataccgaagagcgcaatatttccaccgccgaagacccggtggaaatt
aacttggaaggtgttaaccaagttcatattaataataaagcgggtctcacattcgcttca
gcccttcgttccttcctgcgtcaagatcctgatgtggtgatggtcggggaaatccgtgat
ctagaaactgctgaaatcgccatcaaagcagcacaaaccggccacttggtgctttcaact
ctgcacacgaattcagcggcagaaacattaacacgtcttctgaacatgggtgttccaggc
tacaacatagcaagctccgtgaatctcatcattgcccagcgtcttgcccgtagactatgt
ccggagtgtaagcaaccagaagagatcccacagcatgagcttgaacgactaggattctcg
ccggagcagatttcagaaggttttactgtattcaagccctgcggctgcgacctctgctct
ggtggttacaaaggccgcgtaggtatttatgaagtgatgcccatgtctgacgagattgcc
cgggttattatggagggtggcaactcactggagattgccagaatggccaaaacgcagggc
attagggacctcaggcaatcgggccttttaaaagtcgtccaaggcgttaccagcatcaca
gaagtgaaccgggtaaccagtttctaa
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