Shewanella khirikhana: STH12_04100
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Entry
STH12_04100 CDS
T06711
Symbol
yjiR
Name
(GenBank) putative HTH-type transcriptional regulator YjiR
Organism
skh
Shewanella khirikhana
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
Asp_aminotransf
Motif
Other DBs
NCBI-ProteinID:
AZQ13126
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Position
4656018..4657406
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AA seq
462 aa
AA seq
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MKKYQQVAEAIARQIREGRYGLGERLPSVREVCGRFGISMSTAQAAFRLLEDQALAQARP
GAGFYVSFRGTPQVPGEGPARYEVHNRMLQVLSWCAQPGITDLGTAVLSPGLLPRAALSK
LLARQARFEMATVLQPLFSGGHPPLRREIAKRLILQGIELGESEVLVTGGCQDAISLALS
AIAHAGDTIAVESPCFPGLLQVIESLGMKVLEIPCSPGQGLSVEALQLALARWQVAALVL
CPDFSNPTGSQMPLANRQRLLALAGEHDLAIIEDDLFSELQEPGKGIPALKALDTDGRVI
YCSSVAKSLGSGLRLGWLCGGRYHGDIAKLKAFRNVSEPLIIQALVAEFMASGGYGRHLG
SLGKRLQLNLKKLRGWVEQAFPGQTQIGRPEGGFVLWVSLPGIDSGRLLSLAVAEGVAFF
PGDVFSGAGQYNHCLRLSGAFDDDDKTQKAVAVLGRLAHSLL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatcagcaagtcgccgaggctatcgccaggcagatccgcgaaggccgttat
ggcctgggcgagcgtttgccttcggttcgggaggtgtgcggccgttttggcatcagtatg
tctactgcgcaggccgcgtttcggctgttggaagatcaggcgctggcacaggcgcggccg
ggcgccggtttttatgtgagttttcgcggcacgccgcaggtacctggggaggggccggcc
aggtatgaggtgcataaccgcatgctgcaggtgctgtcctggtgtgcccagcctggcatc
acagatttgggtaccgcggtcctgtctcccgggctgttgcccagagcggctctgtcgaag
ctgctggctcgtcaggcacgctttgagatggcaaccgtgctgcaaccgcttttcagtggt
ggccatccaccgctgaggcgtgaaattgccaagcggctgatattgcaagggattgagctt
ggtgaaagcgaggtgcttgttaccggtggctgtcaggatgccatttcacttgccctcagt
gccattgcccacgcgggcgacaccattgcggtggaaagcccctgttttcccgggctgctg
caggtgattgaatcattgggtatgaaggtgctggaaattccctgctcgcccggacagggg
ctcagtgtggaggcgctgcaactggcgctggcacgttggcaggtggcggctctggtgctt
tgcccggatttttccaatcccaccggtagccaaatgccgctggccaatcggcaacgcttg
ctggcgctggctggagagcacgatctggcgattatcgaggatgacctgttttctgagttg
caggagccgggcaaaggcatcccggcgctgaaggcgctcgatactgacgggcgggttatc
tactgctcatcggtggcaaagtcgctgggttctgggctcaggctcggttggctgtgcggc
ggccgttatcatggcgatatcgccaaattgaaggcatttcggaatgtatctgagcctttg
attattcaggcattggtggcggagttcatggccagtggtggctatggcaggcaccttgga
agccttggaaaacggctgcaactgaatctgaaaaaactgcgcggctgggtggagcaggcc
tttccgggtcagactcaaatcggtcggccagaggggggctttgtgctctgggtaagcttg
cccggcatagactcggggcggctattgtccctcgcggttgccgaaggggtggccttcttc
ccgggggatgtgttttccggggcggggcaatacaaccactgcctgcgtttaagtggtgcc
ttcgacgatgacgacaagacccaaaaagccgtggcagtgcttggtcggcttgctcatagt
ttgttgtaa
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