KEGG   Shewanella khirikhana: STH12_04270
Entry
STH12_04270       CDS       T06711                                 
Symbol
stpA
Name
(GenBank) DNA-binding protein StpA
  KO
K03746  DNA-binding protein H-NS
Organism
skh  Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:skh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:skh03036]
    STH12_04270 (stpA)
   03400 DNA repair and recombination proteins [BR:skh03400]
    STH12_04270 (stpA)
Chromosome and associated proteins [BR:skh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    STH12_04270 (stpA)
DNA repair and recombination proteins [BR:skh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      STH12_04270 (stpA)
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS SPT6_acidic CR6_interact NTF2_5 Utp12
Other DBs
NCBI-ProteinID: AZQ13296
UniProt: A0ABM7DXI9
LinkDB
Position
pSTH1:complement(27534..27926)
AA seq 130 aa
MNEFLEMLTHGRRLKAAVKDLPVEQLCKLLAKLETIIADREAEAEEELKANAERNARIEA
IRKQMDEIGLSVEDLGLITAKSASKKRAPRPAKYKIVVDGQEVIWTGQGRTPTAFRNAVE
GGAALEDFLI
NT seq 393 nt   +upstreamnt  +downstreamnt
atgaatgagtttcttgaaatgttaacacacgggcgccgtttgaaagcagcagtcaaagat
ctaccagttgagcagttgtgtaaattgcttgcgaagttagagacaattattgctgatcgt
gaagccgaggctgaggaagagttgaaagccaacgcggaacgaaacgctagaattgaagct
attcgtaagcaaatggatgaaattgggctgtcagtagaggatttaggtcttataacagct
aaatccgcaagtaagaagcgagcacctcgaccagctaaatacaaaatcgtcgtagatggc
caggaagttatctggacaggtcaggggcgtacacctacggcatttcggaatgccgtagaa
ggcggtgcagctttggaagatttcctaatttaa

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