Streptococcus koreensis: D7D50_00550
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Entry
D7D50_00550 CDS
T06405
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ski
Streptococcus koreensis
Pathway
ski03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D50_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ski03019
]
D7D50_00550
Messenger RNA biogenesis [BR:
ski03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7D50_00550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
DivIVA
KH_NusA_2nd
KH_2
vATP-synt_E
V-ATPase_G
Motif
Other DBs
NCBI-ProteinID:
AYF93222
UniProt:
A0ABN5PVA0
LinkDB
All DBs
Position
complement(88485..90092)
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AA seq
535 aa
AA seq
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MEFGIAIVFAAIIGLVIGYVGISVKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLETRLAERSNNLDRKDDIL
TSKEQTLEQKEQSLSDRTKHIDAREEQLHELEKKKEEELEKIASLTQSEARDIILTQTEE
HLSKEIATRIRDAEMEIKERSDKVAKDILVQAMQRMAGDFVAEQTNSTVHLPDDAMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRQEIDQRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAVADALSAARPGARSESLESYIKRLQDLEEIANSFKGVKTSFALQ
AGREIRIMVSPEEVKDDKLTILAHDIREKIESNLEYPGNIKVNVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggaattgcaattgtttttgccgcaatcattggtttagtcattggatatgta
gggatctcagtcaagatgaaagcatctaaagaagctgcagaacttactcttttaaatgct
gaacaagaagcaacgaatttacgtggacaggcagagcgtgaagctgatttgattttgaaa
gaagctaagcatgagtctagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgagaagaagtcgatgctgagtttaaatcagagcgtcaagaattaaaa
caattagagacccgcttagcggaacgttcaaataatcttgatcgcaaagatgatattctt
acgagcaaagaacaaactcttgaacaaaaagagcaaagtctttcagatagaactaaacac
attgatgcgcgtgaagaacaattacatgagctagaaaagaaaaaagaagaagaattagaa
aaaattgcttctcttactcaatcggaagcacgtgatattatcttaacgcaaacagaagaa
catctttcaaaagaaattgcaactcgtatccgagatgcagaaatggaaataaaagaacgt
tcagacaaagttgcgaaagatatcttggttcaagccatgcaacggatggcaggtgatttt
gttgcagaacagaccaactcaacggttcatttgccagatgatgcgatgaagggtcgaatc
attggtcgcgaaggtcgaaatattcgtacctttgaaagcttaacaggtgtggatgttatt
attgacgatacaccagaagtggtcaccttgtctggatttgatccgattcgtcgggaaatt
gcacggatgacgatggaaagtctattgaaagatggtcgaatccatccagcccgtattgag
gagttggtagagaagaaccgtcaggaaattgaccaacggattcgggaatatggggaagcg
gctgcttatgaaattggagcgccaaacctacatcctgacttgatgaagattatggggcgc
ttgcaatttagaacctcttatggtcaaaatgttctgcgtcactcaattgaggttgctaag
ttatctggtattattgctagtgaacttggcgaaaatgctaccttggctcgtcgagctggt
ttcctacatgatattggaaaagccatcgaccgtgaggtagaaggtagccacgtagaaatt
ggaacagagttggctcgtaaatacaaagagcatcctgttgtcgttaataccattgctagc
caccatggagacgttgaaccagaaagtgtcattgctgttattgtagcagtagcggatgct
ttaagtgcggctcgtccaggtgctcgtagtgagtctctcgaaagctatatcaaacgtctt
caagatcttgaagaaattgcaaatagctttaagggagtcaagactagctttgccttacaa
gcaggtcgtgaaatccgaattatggtaagccctgaagaagtgaaggatgataagttgacc
atcttagctcatgacattcgtgagaagatcgagtctaacttggaatatcctggtaatatc
aaggtgaacgttattcgtgaattgcgtgccgttgattatgcaaaataa
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