KEGG   Streptococcus koreensis: D7D50_00550
Entry
D7D50_00550       CDS       T06405                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ski  Streptococcus koreensis
Pathway
ski03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ski00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D7D50_00550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ski03019]
    D7D50_00550
Messenger RNA biogenesis [BR:ski03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D7D50_00550
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD DivIVA KH_NusA_2nd KH_2 vATP-synt_E V-ATPase_G
Other DBs
NCBI-ProteinID: AYF93222
UniProt: A0ABN5PVA0
LinkDB
Position
complement(88485..90092)
AA seq 535 aa
MEFGIAIVFAAIIGLVIGYVGISVKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLETRLAERSNNLDRKDDIL
TSKEQTLEQKEQSLSDRTKHIDAREEQLHELEKKKEEELEKIASLTQSEARDIILTQTEE
HLSKEIATRIRDAEMEIKERSDKVAKDILVQAMQRMAGDFVAEQTNSTVHLPDDAMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRQEIDQRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAVADALSAARPGARSESLESYIKRLQDLEEIANSFKGVKTSFALQ
AGREIRIMVSPEEVKDDKLTILAHDIREKIESNLEYPGNIKVNVIRELRAVDYAK
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggaatttggaattgcaattgtttttgccgcaatcattggtttagtcattggatatgta
gggatctcagtcaagatgaaagcatctaaagaagctgcagaacttactcttttaaatgct
gaacaagaagcaacgaatttacgtggacaggcagagcgtgaagctgatttgattttgaaa
gaagctaagcatgagtctagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgagaagaagtcgatgctgagtttaaatcagagcgtcaagaattaaaa
caattagagacccgcttagcggaacgttcaaataatcttgatcgcaaagatgatattctt
acgagcaaagaacaaactcttgaacaaaaagagcaaagtctttcagatagaactaaacac
attgatgcgcgtgaagaacaattacatgagctagaaaagaaaaaagaagaagaattagaa
aaaattgcttctcttactcaatcggaagcacgtgatattatcttaacgcaaacagaagaa
catctttcaaaagaaattgcaactcgtatccgagatgcagaaatggaaataaaagaacgt
tcagacaaagttgcgaaagatatcttggttcaagccatgcaacggatggcaggtgatttt
gttgcagaacagaccaactcaacggttcatttgccagatgatgcgatgaagggtcgaatc
attggtcgcgaaggtcgaaatattcgtacctttgaaagcttaacaggtgtggatgttatt
attgacgatacaccagaagtggtcaccttgtctggatttgatccgattcgtcgggaaatt
gcacggatgacgatggaaagtctattgaaagatggtcgaatccatccagcccgtattgag
gagttggtagagaagaaccgtcaggaaattgaccaacggattcgggaatatggggaagcg
gctgcttatgaaattggagcgccaaacctacatcctgacttgatgaagattatggggcgc
ttgcaatttagaacctcttatggtcaaaatgttctgcgtcactcaattgaggttgctaag
ttatctggtattattgctagtgaacttggcgaaaatgctaccttggctcgtcgagctggt
ttcctacatgatattggaaaagccatcgaccgtgaggtagaaggtagccacgtagaaatt
ggaacagagttggctcgtaaatacaaagagcatcctgttgtcgttaataccattgctagc
caccatggagacgttgaaccagaaagtgtcattgctgttattgtagcagtagcggatgct
ttaagtgcggctcgtccaggtgctcgtagtgagtctctcgaaagctatatcaaacgtctt
caagatcttgaagaaattgcaaatagctttaagggagtcaagactagctttgccttacaa
gcaggtcgtgaaatccgaattatggtaagccctgaagaagtgaaggatgataagttgacc
atcttagctcatgacattcgtgagaagatcgagtctaacttggaatatcctggtaatatc
aaggtgaacgttattcgtgaattgcgtgccgttgattatgcaaaataa

DBGET integrated database retrieval system