Streptococcus koreensis: D7D50_03875
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Entry
D7D50_03875 CDS
T06405
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ski
Streptococcus koreensis
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ski03400
]
D7D50_03875 (radA)
DNA repair and recombination proteins [BR:
ski03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D7D50_03875 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
AAA_22
AAA_16
GvpD_P-loop
AAA
ABC_tran
AAA_14
AAA_24
SLFN-g3_helicase
nSTAND3
NTPase_1
TniB
NACHT
MCM
AAA_19
ATPase_2
Rad17
AAA_5
DUF7129
HypA
NPHP3_N
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
AYF93786
LinkDB
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Position
740303..741664
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AA seq
453 aa
AA seq
DB search
MAKKKTTFICQNCAYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLA
DVTSINVHRTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLY
VSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEVERLQPNFLIIDSIQTIMSPEI
SGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGS
RPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVK
LDEPAIDLAVAVAIASSYKELPTNPQEAFIGEIGLTGEIRRVTRIEQRINEAAKLGFTKI
YAPKNSLQGITIPDGIQVIAVSTVGEVLKKVFS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atcgctaagaaaaaaacgacatttatttgtcaaaattgtgcctacaattcacccaaatac
ctagggcgctgtcctaactgtggttcttggtcttcttttgtcgaggaggttgaggtcgca
gaggtcaagaatgcccgggtgtccttgacaggtgagaaaacaaaacccatgaaactggcg
gatgtgacctctatcaatgtccatcgtactaagaccgagatggaggaattcaaccgcgtc
cttggaggcggtgtcgtcccaggaagtctggtcctcatcggtggagatcctggaattggt
aaatcgactctcctcttacaagtatcgacccaactatctcaagtgggaacggtcctctac
gttagtggagaggagtcagcccagcaaatcaaacttcgggcagagcgcttgggggatatt
gacagtgagttttatctctatgcggagaccaatatgcaaagcgtgcgagcagaagtggag
cgcctccagcctaacttccttatcattgactctatccagactattatgtctcctgagatt
tcaggggtgcagggatcggtttctcaggtgcgggaagtgacggcagagctcatgcagctg
gctaagaccaataatatcgccatcttcatcgttggccatgtgaccaaggaaggaaccttg
gcaggtcctcggatgttggagcacatggtggatacagtgctctactttgaaggggagcgc
caccataccttccggatcctgagagcggtcaagaaccggtttggatccaccaatgaaatt
gggattttcgagatgcaatcaggtggcctagtcgaagtcctcaatccgagtcaggtcttc
ctagaagaacgcttggatggggcgactggttctgctattgtcgtcaccatggaaggaagt
agaccaatcttggcggaggttcaggccttggtgaccccaactgtttttggaaatgccaag
cggacgacgacaggtcttgactttaatcgggtcagcctcattatggctgttttagagaaa
cgttgcggacttcttcttcaaaatcaagatgcctatctcaagtcagctggtggtgtcaaa
ctggacgaaccggccattgacctagccgtagcggtagccattgcgtctagctacaaggag
cttccaaccaatcctcaagaggcctttatcggtgagattggcttgactggggagattcgt
cgagtgactcggattgagcaacggatcaacgaagcggctaaacttggcttcactaagatt
tatgcgccaaaaaattctctccaaggcatcacaatcccagatggtattcaagtgatagcg
gtctccactgtaggagaggttctgaaaaaagtcttttcttaa
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