KEGG   Streptococcus koreensis: D7D50_04415
Entry
D7D50_04415       CDS       T06405                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ski  Streptococcus koreensis
Pathway
ski03030  DNA replication
ski03430  Mismatch repair
ski03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ski00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D7D50_04415
   03430 Mismatch repair
    D7D50_04415
   03440 Homologous recombination
    D7D50_04415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ski03032]
    D7D50_04415
   03400 DNA repair and recombination proteins [BR:ski03400]
    D7D50_04415
Enzymes [BR:ski01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D7D50_04415
DNA replication proteins [BR:ski03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D7D50_04415
DNA repair and recombination proteins [BR:ski03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D7D50_04415
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AYF93883
UniProt: A0ABM6Z8W4
LinkDB
Position
complement(859355..859948)
AA seq 197 aa
MKELSHYVSFDLEFNQFEGKYHIIQVSAVRFADGQEVAHYDSYAYTDKPLKSFINGLTGI
TSDKILQAPPLEQVLTEFRDFVADSPLIGYNAIKSDLPILAENGLEFTDQYAVDVFEEAS
KRRPSDLHGIKNLQLHTVAQFLGVAGKSHDSLEDARMTALVYEAFLESDRARQLLTEQES
FSTSPFGGLDLSNFFND
NT seq 594 nt   +upstreamnt  +downstreamnt
ttgaaagaattaagccactatgtctcctttgatttagaatttaatcaatttgaaggaaag
taccacattatccaagtttctgccgtccgctttgcagatggccaagaagttgcccactac
gattcctatgcctatacggataaaccactaaagagctttatcaatggcctcaccgggatt
acatctgataaaatcctccaagctcccccactcgagcaagttctaacggagtttcgagat
tttgttgcagatagtcccctcattggatacaatgccatcaagagtgacctccctatccta
gcggaaaatgggctagagttcacagaccaatatgctgttgatgtctttgaggaagcttct
aaacgccggccttctgacctccatgggatcaagaacttgcagctccatacagttgctcag
tttttaggggtggctggaaaatcccacgatagcctagaagatgcccggatgactgccctt
gtttatgaagcctttctcgaatcagaccgggcccggcaactcctaaccgaacaagaatcc
ttttctacctctccttttggtggattggacctctccaatttttttaacgactaa

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