Streptococcus koreensis: D7D50_08830
Help
Entry
D7D50_08830 CDS
T06405
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ski
Streptococcus koreensis
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ski03400
]
D7D50_08830 (addA)
Enzymes [BR:
ski01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D50_08830 (addA)
DNA repair and recombination proteins [BR:
ski03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D7D50_08830 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
DUF2059
AAA_22
AAA_16
AAA_7
KdpD
AAA_30
ResIII
AAA_25
YueH
Motif
Other DBs
NCBI-ProteinID:
AYF94680
LinkDB
All DBs
Position
complement(1751697..1755374)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKPIEFLNPSQIQDLQVQEAQSDKEPKRTPEQIEAIYSSGTNILVSASAGSGKTFVMVQR
ILDQLHRGISIQQLFISTFTVKAATELKERLEKELEKSLKATKDEELKHHLAQQIAELPT
SDIGTMDAFTQRLVSKYSYLLGLSPTFRILQSASEQSLLKNDCFEQVFEQFYEEQGPERL
FSRLVKNFTGKGKSLAGFKDQVYALVDFLQSTADPLAWLEESFLKGYQDLDYDEALDQLA
QKVKEQLFELESFFSFHLANEGQAFSGAKYQENVTSIQDLIARLNEKSSQEAIFEVLERV
VLISRASGGRSLTITTRKEDLRELATAFNDERKERIEALRAAASQHYQLTYQIRFKDEPL
PLLVLLRDFVQAFSIAYLERKKQENAFEFGDISHFAIQILEEFPHIRSLYQERYHEVMVD
EYQDTNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNDKFKAYQEEGADGKLI
LLKENFRSHVEVLEATNHVFERLMDEEVGEILYDQSHRLIAGNPEKKEPTPAYETEFLLY
DGSQDVAETSEEEEQEGDSLSSGEVLLVIKEIIRLHNEEGVNFKDITLLTASRTRNDKVL
SAFEAYQIPIVADGGEENYLQSVEVMVLLDTLRTINNPLQDYPLVALMKSAMFEFDEDQL
ARLALQGVEGKKAENLYEKLQHALDQTGSAPQLIDSSLREKLTRFMETLDAWRDYAQTHS
LYDLLWKIYQDRHYYDYVGALPNGAQRQANLYALTLRANDFERSSFKGLPRFISMIDKIL
ENQHDLANVAQAVPKDAVQLMTIHKSKGLEFPYVFILNTDKKFVGKELSTNAVISRKNGV
GIKYIANLPVESDQEGLLEAVRLVIETLPYQRNVEEIRLAALSEQMRLLYVAMTRAERKL
YLVGKGRQDKLEERKWGASVNGRLSPALRKEINCFQDWLYAIQAVFAQQHLAYQTHFVTD
QDLTPEQIGHLELKTSLPVDDLKDNRQSEEIRRALDVLESVDRLNTQYQAAIQLPSVRTP
SQIKKFYEPIQDIEGVDLMEKADVPLPSFEFPNFGKEEAVTGAAVGSALHELMQRIPLTT
VPTMESLTMVLQEVNASPAVKERIDLKKVLAFFQSDLGQLLLKESGKVHREAPFAMLKTD
PTSGQDFVVRGILDGYLLLEDRILLFDYKTDRYRNPQDLLDRYQAQLELYAEALRRSYGI
DSIESYLILLGGEQLQVVSLADRKD
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattgaatttttaaatcccagccagattcaagacctccaagtccaggaggcc
cagtctgataaggaaccaaagcggacacctgagcagatagaagctatctattcgtcagga
accaatatcctagtctcagcttcggccggttctgggaagacttttgtcatggtccaacgg
atcctggatcaattgcaccgagggatttccatacagcaattgtttatctcaacctttacg
gtcaaggcagcgactgagctcaaggaacgcttggaaaaggagttggagaagagcctaaag
gctaccaaggacgaggagctcaagcaccacctggcccaacaaattgcagaattaccaact
agtgatatcgggaccatggatgccttcacgcagcgactggtctccaaatatagctattta
ttaggcctctcgccgacctttcgtatcctccaaagtgctagtgagcagtccttactcaag
aatgactgcttcgagcaagtctttgagcagttttatgaggagcaagggcctgaacgcctc
tttagtcgcttggttaagaacttcacaggaaagggtaagtcgctagcaggttttaaggac
caggtatacgccctagtagacttcttgcaatccactgcggatcctctcgcctggttggag
gagtccttcctcaaaggctatcaggatctggactatgatgaagccttggaccagttagcc
caaaaggtcaaagaacaactctttgaattggaatctttctttagcttccatctggctaac
gaaggacaagcattttcaggggccaagtaccaagaaaatgtcacctctattcaagacttg
attgctcgtctcaatgagaaatccagccaggaagcgatttttgaagtcttggagcgggtg
gtcttgatctcccgtgccagtggaggacgaagcctgaccatcacgacacgaaaagaagac
ctgagagagttagcgactgcctttaatgacgaacgcaaagaacgcatcgaagccttgcgg
gcagcagcttcccagcactaccaactaacctatcagattcgcttcaaggatgaacccttg
cctttgctagtcttgctcagggattttgtccaagctttctcgattgcctatttggagcgc
aagaagcaggaaaatgcctttgaatttggcgatatcagccattttgccatccagattctt
gaagaatttcctcatatccgcagtctctatcaggagcgctaccacgaggtcatggtcgat
gagtaccaagataccaaccacactcaagagcggatgttggagctcttgtctaatggccac
aaccgcttcatggtgggagatatcaagcagtctatctaccgcttccgtcaggctgatcct
cagatttttaatgacaagtttaaggcctaccaagaagaaggggcagatggcaaattgatc
ctgctcaaggagaatttccggagccatgtagaggtcttagaagcgaccaaccatgtcttt
gaacgtctaatggatgaggaagttggggagattctctatgaccagagccaccgcttgata
gcgggaaatccggagaagaaagagccgacgccagcttatgagacggagttcctgctctat
gatggcagtcaggacgtagctgaaacaagtgaagaagaggagcaagaaggtgatagccta
tcctcaggtgaagtccttttggtcatcaaggagatcatccgcctccacaatgaagaaggg
gtaaacttcaaagatattacgcttttgacggcttctcggacccgtaacgacaaggtgctt
tcagcctttgaagcctatcaaattcctatcgttgcggacgggggagaggaaaactacctc
cagtctgttgaggtcatggtcctcttggataccctccggaccattaacaatcccttacag
gactatcccttggtggccctcatgaaatcagctatgtttgaatttgacgaggaccagtta
gctcgcttagctttacagggagttgaaggcaagaaagcagaaaatctctatgagaaactg
cagcatgccttagaccagactggaagtgctcctcagttgatcgattcaagcttaagagag
aaactcactcgctttatggagacactggatgcctggcgtgactatgcccagacgcattct
ctctatgacctgctttggaagatttaccaggatcgacactactatgattatgtgggtgcc
ttgccaaatggtgcccaacggcaggccaatctctatgccttgacccttcgggccaatgac
ttcgaaagatctagcttcaagggattgcctcgctttatctccatgattgataagatcttg
gaaaaccagcacgacttggccaatgttgcccaggcagttcctaaggatgctgtccaactc
atgaccatccataagagcaagggacttgagttcccctacgtctttatcctcaataccgat
aaaaagtttgtcggcaaagaactgtctaccaatgccgttatcagtcggaaaaatggggtg
ggcatcaagtatattgcgaatcttcctgtcgagtctgatcaagagggacttcttgaggcg
gttcgattggtcattgagaccctgccttaccagcgaaatgtcgaggaaattcgtctggca
gccttgtcggagcagatgcgtctcctctatgtcgctatgacccgggcagagcgtaagctt
tatcttgtcggtaagggccggcaggataagctggaagagagaaaatggggagccagtgtc
aatggacgcttgagcccagctcttcggaaggagatcaattgtttccaagactggctctat
gccattcaggcagtctttgcccagcaacacttagcctatcagactcattttgtgaccgac
caagacttgacgccggagcaaatcggccacttggagttgaagacgtccctcccagtcgat
gacctgaaggacaaccgccaatcagaagagattcggcgtgccctggatgtcttagaatct
gtggaccggctcaacacccagtaccaagcagctatccaactgcctagtgtgcggacccca
agtcaaatcaaaaaattctatgaacccatccaagatatcgaaggagtggatctcatggaa
aaagcggacgttcccttaccaagctttgagtttccaaattttggcaaggaagaagctgtg
acaggggcagcagtcggtagtgccctgcatgaactgatgcaacgaattccattgacgaca
gttccaacgatggagagcttaacaatggttctccaagaggtcaatgccagcccagctgtc
aaggagcgaatcgacctcaaaaaggtcctggccttcttccagtctgacttgggccaactc
ttgctcaaggagtcaggcaaagtccatcgtgaagccccatttgccatgctcaagacggat
ccgactagtggccaggactttgtagtccgggggatcttggacggctacctgcttctagaa
gatcggatccttctctttgactacaagacagaccgctaccgcaaccctcaggacttgcta
gatcgctaccaagcccaactggaactctacgcagaagccctccgtcgctcttatggtata
gacagcatcgaatcgtatttaatcttactaggaggcgagcaattacaggtcgtttcacta
gcagatagaaaggattaa
DBGET
integrated database retrieval system
