Streptococcus koreensis: D7D50_09115
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Entry
D7D50_09115 CDS
T06405
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ski
Streptococcus koreensis
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ski03016
]
D7D50_09115 (truB)
Enzymes [BR:
ski01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7D50_09115 (truB)
Transfer RNA biogenesis [BR:
ski03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7D50_09115 (truB)
Prokaryotic type
D7D50_09115 (truB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AYF94732
UniProt:
A0ABM6ZB80
LinkDB
All DBs
Position
complement(1821638..1822534)
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AA seq
298 aa
AA seq
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MNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPEVVGVLPIAVGKATRMVEFMQ
DEGKVYEGEITLGYSTTTEDASGEVVERTPVEAPLDATEVDRMIAQMVGEMEQIPPMYSA
VKVNGRKLYEYARAGEVVERPVRQVTIYDFTRIGEISYEEGLARFRFRVKCSKGTYIRTL
SVELGQKLGYAAHMSHLTRTSAAGLSLDDALTLEEVAEKVGQGDLSFLHPLEIGTGDLEK
VELTVEEVGEVQVGRFIPVESEARELAAFYQGKLVAIMEKREELYKPRKVFLTESVLQ
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtattatcaacttaaaaaaagaagcaggcatgacctcgcatgatgcggttttt
aagctacgtaagattttaggaactaaaaaaatcggtcatggtgggaccttggatccggag
gttgtgggtgttttacctattgctgtgggaaaggcgactcgcatggtagagttcatgcag
gatgaggggaaggtctacgagggggaaatcactctgggatattcaacaacgaccgaggat
gctagtggggaagtcgtagagcggaccccagtggaagcccctttagatgcaacagaggtg
gaccgcatgattgcccagatggtgggagaaatggagcagataccgcctatgtactcagca
gtcaaggtcaacggacgtaagctctatgaatatgcgcgggcaggagaagtagtggaacgc
cctgtccgacaggtgacgatttatgactttacgcgcatcggtgagattagctacgaggaa
ggactagcccgttttcgcttcagggtcaaatgcagcaaggggacctatatccggaccttg
tcggtggaattgggtcaaaagttgggttatgcagcccatatgtctcatctgacccgaacc
agtgctgccggtttgtcactggatgatgccctgaccttagaagaagtagctgaaaaagta
gggcaaggagatttgagcttccttcatccacttgagattggtaccggggatctggaaaaa
gtagagctgacagttgaagaagttggcgaagtccaagtgggacgctttattccagttgag
agcgaagccagagagttagctgcgttttaccaagggaaattggtagccattatggaaaaa
agggaagaactttacaaacctcgcaaggtttttctgacagaaagtgtgttacaataa
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