Streptococcus koreensis: D7D50_09160
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Entry
D7D50_09160 CDS
T06405
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ski
Streptococcus koreensis
Pathway
ski03420
Nucleotide excision repair
ski03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ski00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7D50_09160 (pcrA)
03430 Mismatch repair
D7D50_09160 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ski03400
]
D7D50_09160 (pcrA)
Enzymes [BR:
ski01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D50_09160 (pcrA)
DNA repair and recombination proteins [BR:
ski03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7D50_09160 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D7D50_09160 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
AYF94959
LinkDB
All DBs
Position
complement(1830817..1833102)
Genome browser
AA seq
761 aa
AA seq
DB search
MNPLLNGMNDRQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMKERAYQLNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKSLNLDPKKWNERTILGTISNAKNDLIDEVAYAAQAGDMYTQIVAKCYEAYQKELR
QSEAVDFDDLIMLTLRLFDQNPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKTILQAANDVIKNNKN
RRPKNLWTQNADGEEIVYYRANDEQDEAVFVAKTIEELSREAGYKHRDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDIIAYLNLIANLSDNISFERIINEPKRGIGPG
TVDKIRDFAQMQESSLLDASANIMLSGIKGKAAQAIWDFANLILDLRERLDQLTITELVE
EVLDKTGYMTALTNQGNLESQARIENIQEFLSVTKNFDENGETLEDETGVETLSRFLNDL
ALIADTDDGAQETSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDPDELEEERRL
AYVGITRAEKVLFLTNANSRLLFGRTSYNRPTRFINEISSDLLTYQGLARPANTSFKASY
SNGGGTTFGKGMSLSQALQERKRQAAPSALTSSSLPFGNSNRSSTKESVAWSIGDIALHK
KWGEGTVLEVSGSGNTQELKINFPEVGLKKLLASVAPIEKK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattgaatggtatgaatgatcgccaggcagaggcggtccaaacgacagaa
ggccccctcttgattatggcgggagctggttctggtaagacacgtgtcctgacccaccgg
atcgcttacttgatcgatgaaaaaatggtcaatccttggaatattttggccattaccttt
accaataaagccgctcgggagatgaaggagagggcctatcagttaaacccagcgactcaa
gattgcttgattgccaccttccactccatgtgtgtgcgtattctccgtcgagatgcggat
catattggctacaatcgcaacttcaccattgtcgatccaggtgagcaacggaccttgatg
aagcggatcttgaagtccttgaacttggatcctaagaaatggaatgaacggaccatcttg
gggactatttccaatgccaaaaatgacctgattgatgaagtagcctatgctgcccaagct
ggagatatgtatacccagatcgtcgccaagtgctatgaggcttaccaaaaggaactccgg
cagtcagaagcggtagactttgatgatttgattatgctgaccctgcgtctttttgatcaa
aatcctgatgttttgacctattaccagcagaagttccaatacatccatgtggatgagtat
caagataccaaccatgcccaataccagttggtcaaactcttggcttcacgctttaaaaat
atctgtgtcgttggggatgccgaccagtctatttatggctggcggggagcggatatgcag
aatatcctggactttgagaaggattatcctgatgccaaggtcgttttgttggaggaaaat
tatcgttccactaaaaccatcctacaagcagccaatgatgtcattaaaaacaataaaaat
cgtcgtcctaagaatctttggacccaaaatgctgacggggaagagattgtctattaccgg
gccaatgacgagcaggatgaagcggtctttgttgctaaaaccattgaagagctgagtcgc
gaagcgggctacaagcaccgtgattttgccgttctctaccggaccaatgcccagtcacgg
actattgaagaagccttgctcaagtccaacattccctacaccatggtgggggggaccaag
ttctacagccggaaggaaattcgggatatcattgcttatctgaacttgattgccaacctc
agtgacaatatcagttttgagcgtattatcaatgaacccaagcggggaatcgggccgggt
acagtggataagattcgtgactttgcccaaatgcaagagtcctcactcctggatgcttca
gccaatatcatgctctctggcatcaaaggaaaggcagcccaagctatctgggactttgcc
aatctcattcttgatttgagagaaagattggaccagctgaccattacagagttggtcgaa
gaagtccttgacaagacaggttacatgacggctctaaccaatcaggggaatttagaaagt
caggcccgcatcgagaatatccaagagttcctgtctgttactaagaattttgatgaaaac
ggggaaaccctcgaagacgagacaggtgtggagaccttgagtcgtttcttgaacgatttg
gctttgattgccgatacagatgatggggcccaagaaacttcagaagtcaccttgatgact
cttcacgcggctaagggattggagtttccagtcgtcttcttgattggaatggaggaaaat
gtctttcctcttagtcgtgcagcagaggatccagacgagttggaggaagaacgtcgtctg
gcttatgtggggataacacgggcagagaaggttctcttcttgaccaatgctaactctcgt
ttgctctttggacggaccagctacaaccgcccgacacgctttatcaatgaaattagctcg
gatttattgacctaccagggcttggcccgtccagccaacaccagctttaaggcttcttat
agcaatggaggcggaacgacctttggaaaaggcatgagcctgtcacaagcccttcaagag
cgcaaaagacaagcagccccaagtgctctcacgtcatcaagcctcccttttggcaatagc
aaccgttctagtaccaaagagagcgtcgcttggtctattggcgacattgcccttcataag
aaatggggggaagggactgtcctagaagtctctggtagtggcaatacccaagagctcaag
attaacttcccagaagtgggtctcaagaaactcttggccagtgtagcgccgattgagaag
aaataa
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