Staphylococcus kloosii: C7J89_07475
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Entry
C7J89_07475 CDS
T05401
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
skl
Staphylococcus kloosii
Pathway
skl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7J89_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skl03400
]
C7J89_07475
Enzymes [BR:
skl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C7J89_07475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C7J89_07475
DNA repair and recombination proteins [BR:
skl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C7J89_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
A2L_zn_ribbon
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AVQ35972
UniProt:
A0A921GZV3
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All DBs
Position
1500660..1501532
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPYAKGQTITSVIFSDKVKEGKADGRETIIKGMSLDTFKTFTENFV
IEQIERRSKYIVFHLVNEHEHRILISHLGMAGGFFIVRSLDDITVKNYRNHWHVIFTLDN
DMLLVYSDIRRFGEIRNVPSLEAYPSFLEIAPEPFEDEALSHYLSWFDRKSYVKKPIKQM
ILDHRVIAGCGNIYACEALFRAGIHPNRTTNSLNNQEREMLFYYVREVLSEGIKYGGTSV
SDYRHADGKTGTMQLHLNVYKQKTCKVCGSDIETQVIATRNSHYCPTCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagttgaacatgttaaaagaggcattgagccatatgctaaagga
caaacgataacatctgttattttttctgataaagtaaaagaaggtaaagctgacggacga
gaaacaataataaaaggcatgtcactggatacttttaaaacttttacagaaaattttgtt
atagaacaaattgaaagacgtagtaaatacatcgtttttcatttagttaatgaacacgaa
catagaattttaattagtcatctaggaatggcaggcggattttttatagtcagaagttta
gatgatataactgttaaaaattatcgtaatcactggcacgtcatttttacgttggataat
gatatgttactggtttattctgatattagaagatttggagaaattagaaatgtaccttca
ttagaagcctacccatcgttcttagaaatagctccagaacctttcgaggatgaggcatta
agtcattatctatcatggtttgaccgtaaaagctacgtaaaaaaacctattaagcaaatg
attttagatcatagagtgatagcagggtgtggtaatatatatgcttgcgaagcgttattt
agagctggcattcatcctaatcgaacgacaaatagtttaaataaccaagaaagagaaatg
ttattttattatgttcgggaagtgttatccgagggtataaaatatggcgggactagtgtt
tctgattatcgacatgccgatggtaagacaggaacaatgcaattacacctcaatgtatat
aaacaaaaaacatgcaaagtatgtggcagtgatatagaaacacaagttattgcaacacgt
aacagtcattactgtcctacttgtcaaaaataa
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