Staphylococcus kloosii: C7J89_11880
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Entry
C7J89_11880 CDS
T05401
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
skl
Staphylococcus kloosii
Pathway
skl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7J89_11880 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skl03019
]
C7J89_11880 (recQ)
03400 DNA repair and recombination proteins [BR:
skl03400
]
C7J89_11880 (recQ)
Enzymes [BR:
skl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7J89_11880 (recQ)
Messenger RNA biogenesis [BR:
skl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7J89_11880 (recQ)
DNA repair and recombination proteins [BR:
skl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7J89_11880 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
Motif
Other DBs
NCBI-ProteinID:
AVQ36825
UniProt:
A0A151A6Y1
LinkDB
All DBs
Position
complement(2389167..2390945)
Genome browser
AA seq
592 aa
AA seq
DB search
MEATLSHYFGYDTFRPGQKEIISKIISHRNVLGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKASGISAAFLNSSLTQKQQKAIEQQLLKGEIQFLYVAPERFDNDYFI
SLLQQLPIRLVAFDEAHCISKWGHDFRPSYQDVIYKVFDLPQDFAIVALTATATAEVQKD
IMSRLNINKADEVKTSTKRRNLVFKVNPTYQRQKFVIDYVSQHKQEAGIIYCSTRKQVEE
LHEALEDNNVNSTIYHAGLTNKERELAQNDFVYDRVRVVVATNAFGMGIDKSNVRFVIHY
NMPGDMESYYQEAGRAGRDGLKSDCILLFSERDIGLHQYFISSSKADDDYKDKMGEKLTK
MIQYTKTKKCLEATLVHYFEPNEKLEECQQCSNCVRENKTYDMTHEAKMIISCIARMKQQ
ESYGVIIQVLRGELTDYIRYCEYDKLSTHGIMKDYTTSDLSHLIDELRFKGYLNENDEIL
TCDSNVKSLLNAEKVVFTTPFKRKSKEKVSINTVEGVDKALFDELKDVRQKLSEQLDIAP
VSVFSDYTLEEFAKRKPESKQDMISIDGVGSYKLKHYCPKFLETIQSYKAQI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaactttatcacattattttggttacgacaccttccgtcctggccaaaaggaa
atcataagtaaaattatatctcatcgtaatgtgttaggtgtattacctacaggtggggga
aaatcaatttgttatcaagtaccaggtttaatgctgggcgggacgacgattgttatcagt
ccgttaatttcattaatgaaagaccaagtagaccaattaaaagcgtcaggcattagcgct
gcgtttttaaatagtagtttgactcaaaagcaacaaaaagcaatagaacaacaattgcta
aagggtgaaatacagtttttatatgtagcaccagaacgttttgataacgattattttatt
agcctattacaacaacttcctattcgattagttgcgtttgatgaggcacactgtatatca
aaatggggacatgacttcagaccaagctatcaagatgtcatttataaagtttttgatttg
ccacaggactttgccatcgtagctttaacggcaacagcaacagcagaagttcaaaaagat
attatgtcacgcttgaatattaataaggctgatgaagtaaagacaagtactaaacgacga
aatttagtatttaaagtaaaccctacatatcaacgacaaaaatttgtgattgattatgta
agtcagcataaacaagaagcgggtattatttattgttcgacgcgtaaacaagtagaagaa
ttacatgaggcgcttgaagataataatgttaatagtacgatttatcatgctggtttaacg
aataaagaacgagaactagctcaaaatgactttgtctatgaccgtgtgagagtcgtagta
gccacgaatgcctttggtatgggtatagataaatctaacgtacgttttgttattcactac
aacatgccaggagatatggaatcatattaccaagaggcaggacgtgcaggtcgtgacggc
ttgaaaagtgattgtattttactctttagtgaacgtgatatcggattacatcaatacttt
atctcatcatctaaagcagacgatgattataaagacaagatgggcgaaaaattaactaaa
atgattcaatatacgaaaactaaaaaatgtttagaagcgacgttagtacattactttgaa
cctaacgaaaagttagaagaatgccaacaatgtagtaattgtgtgcgtgaaaataaaact
tatgatatgacgcatgaagcgaagatgattattagctgtattgcacgtatgaagcaacaa
gaaagctatggtgtgattattcaagtgttacgcggtgaactaactgattatattcgttat
tgtgaatatgataaattatcaacgcatggcattatgaaagattatacgacttctgattta
agtcatttaatcgacgaattacgctttaaaggttatttaaatgaaaacgatgagattctg
acatgtgacagtaacgttaaatcattgttgaacgcagaaaaagtagtatttacaacacca
tttaaacgtaagtcgaaagaaaaagtaagtatcaatacggttgaaggtgttgataaagcg
ttatttgatgaattaaaagatgtacgtcaaaaactaagtgagcaattggatatcgcgcct
gttagcgtattttctgattatacgttagaagaatttgctaaacgtaaaccagaatccaaa
caagatatgatttctattgatggcgtcggtagctataaattaaaacattattgtccgaag
tttttagaaacgattcaatcatataaagctcaaatttaa
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