Sinorhizobium kummerowiae: PZL22_000039
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Entry
PZL22_000039 CDS
T09063
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZL22_000039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skm02000
]
PZL22_000039
Transporters [BR:
skm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PZL22_000039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WHS91466
UniProt:
A0ABY8T0S4
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All DBs
Position
pSkuCCBAU71714b:47040..48062
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AA seq
340 aa
AA seq
DB search
MKKILSASTALLLIGAHGASAQEKTLTISVYGFAQDAFKELVYDPFEAKCGCKLVVETGN
SVERLAKMEANKANPVVDMAVVSMADALSATRSGLIDKIDTSKLSNFDKLYDIAKDPNGD
GMSIGYTFYATSIVYRSDKVEVTSWADLLGDKLAGHVALPNVTTNQGPPTLYMIGEALGQ
NTPDLKAAIAAVGEKKDDIVTFYVKSSQLVQLMQQEEIWAAPIGRFSWEGFTKMDLPIKW
ATPKEGQTGGMNVMVLAKGSKNQDLALQFMDFWLSTEIQTALAEKLVDSPANKEVKVSPE
IAENLTYGEETVKNLKLIPSAVALDNREAWLSEWNAKVGQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatcctcagcgcctcgaccgcgctcctcttgatcggcgcccatggcgcatcc
gctcaggagaagaccctgaccatctccgtctacggcttcgcccaggacgcgttcaaggag
ctggtctatgatcccttcgaagccaagtgcggctgcaagctcgtcgtcgaaacgggcaac
agcgtcgagcgccttgccaagatggaggccaacaaggccaacccggtcgtggacatggcg
gtcgtttccatggcggacgcgctatctgctacacgctccggcctgatcgacaagatcgat
acctcgaagctcagcaatttcgacaaactctacgacatcgccaaggacccgaacggcgac
ggcatgagcatcggctacactttctatgcgacctcgatcgtctatcgttccgacaaggtg
gaagtcacgtcctgggccgatctgctcggcgacaagctcgccggccatgtggctctcccg
aacgtcacgaccaaccagggtccgccgacgctctacatgatcggtgaagcgctcggccag
aatacgccggacctcaaggccgcgatcgccgcagtcggcgagaagaaggacgatatcgtc
accttctacgtcaaatcctcgcagctcgtgcagttgatgcagcaggaagaaatctgggcg
gcgccgatcggccggttctcctgggaaggcttcaccaagatggatctgccgatcaagtgg
gcgaccccaaaggagggccagaccggcggcatgaacgtcatggttctggccaagggctcg
aagaaccaggatctcgcgcttcagttcatggacttctggttgtcgacggaaatccagacg
gcgctcgccgaaaagctggtcgacagccccgccaacaaggaagtgaaggtctcgccggag
atcgccgagaacctcacctacggcgaagaaacggtcaagaacctgaagctcatcccgtcg
gcagtggcactcgacaatcgggaagcgtggctttccgagtggaacgccaaggtcggccag
taa
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