KEGG   Sinorhizobium kummerowiae: PZL22_000122
Entry
PZL22_000122      CDS       T09063                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
skm  Sinorhizobium kummerowiae
Pathway
skm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:skm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PZL22_000122
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:skm02022]
    PZL22_000122
Two-component system [BR:skm02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PZL22_000122
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_50 AAA_2 AAA_16 FleQ TadZ_N PDE8A_N Tnp_IS2_N AAA_3 AAA
Other DBs
NCBI-ProteinID: WHS91545
UniProt: A0ABY8T306
LinkDB
Position
pSkuCCBAU71714b:complement(149690..151033)
AA seq 447 aa
MSESRILLVDDEEELRRSSAQALELAGFRVDTFASAEYALERIAFSFHGVVISDIRMPGM
DGMTFLQRIREIDAELPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQMLAGTIRRALD
WRSLVLENRRLRAVAGKRDDVEQRLPGRSQAMVDLRYRIRAIGASDADTLIIGETGVGKE
VVARALHDLSSRASGPFIAINCAALPENLIESELFGHEPGAFPGALRPRYGKFEHGRGGT
ILLDEIGSMPFDLQAKFLRVLQERVITRLGSNETVPLDVRFIATSKVDLEREVASSRFRA
DLLYRLNVATLRVPTLSQRRSDIPLLFMQLVRESAARYGRDDIVVSPALASEMAAREWPG
NVRELRNAAERLVLGLEVEREEALAPANRPRLTDKVAAFEKSVIASALAAHGGALKPVYE
SLGISRKTLYEKMQKFGLDKKALSEER
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagcgaaagccgcatcctgctcgtcgacgatgaagaggaactgcgtcgctccagcgct
caggccctggaactcgccggcttccgggtggatacgttcgccagcgccgaatatgcactc
gaacgcatcgcctttagcttccacggcgtcgtcatcagcgatatccgcatgcccggaatg
gacggaatgacctttctgcagcgcatccgggagatcgatgccgaactgccggtgatcctg
gtgacgggacacggcgatgtgcaacttgcggtccgggcgatgcgcgaaggcgcctatgat
ttcgtcgaaaagcccttcaccgcccagatgcttgccggcaccattcgccgcgcgctcgat
tggcgcagtctcgtgctcgaaaaccgccgcctgcgggccgttgcgggcaaacgcgacgac
gtcgaacagcggctgcccgggcgaagccaggcaatggtcgacctgcgctaccgcatcagg
gcgatcggcgcctccgacgccgatacgctgatcatcggcgaaacgggagttggaaaagaa
gtcgtcgcccgcgcgctccacgatttgagcagccgcgcgagcggcccgttcatcgccatc
aattgcgcggctcttccggaaaacctgatcgaaagcgagctcttcgggcacgaaccgggc
gcattccccggagcgctcaggccgcgttacggcaaattcgaacatggccgcggcggcacc
atcctgctcgacgagatcggctccatgcctttcgatctccaggcgaaattccttcgcgtg
ctgcaggagcgggtcataacgcgcctcggctcgaacgagaccgtaccgctcgatgttcgc
ttcatcgccaccagcaaggtcgatctggaacgcgaggtagcaagcagccgctttcgtgcc
gacctgctttaccggttgaacgtcgcaaccttgagagtgccgacgctttcgcagcgccgc
tccgatatccccctgctcttcatgcagctcgtccgcgaatccgccgctcgctacggccgg
gacgacatcgtcgtctcgcccgcgctcgcttcggaaatggccgcacgcgagtggcccggc
aacgtgcgcgagttgcgcaatgccgccgagcgcctggtcctcgggctcgaagtcgaacgc
gaagaggcgctcgcaccggcgaaccgcccgcgcctgaccgacaaggtggccgccttcgaa
aagagcgtcatcgccagcgcccttgcggcccatggcggcgcgttgaagcccgtctacgag
tcgctcggcatctcgcgcaagacgctgtatgaaaagatgcagaagttcgggctcgacaag
aaggcgttatcggaggagcggtga

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