KEGG   Sinorhizobium kummerowiae: PZL22_000453
Entry
PZL22_000453      CDS       T09063                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
skm  Sinorhizobium kummerowiae
Pathway
skm03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:skm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PZL22_000453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:skm03400]
    PZL22_000453
DNA repair and recombination proteins [BR:skm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PZL22_000453
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: WHS91843
UniProt: A0ABY8T3S6
LinkDB
Position
pSkuCCBAU71714b:513426..514244
AA seq 272 aa
MAPPRPYWKGYLKLSLVTCPVSMMPATSESEKVRFHTLNRTSNNRVVSRYVDAVTGKEVD
EDDEVKGYERGENDFLVIEDEELESVALESARTIDIEKFVPRDTIEWIWLEKPHYLTPSD
EVGHEAFSVIRDAMVAEKVAGISRLVIGRRERAVMLEPCGKGIVVWTLRYGDEVRKPENY
FADIGDGDNDPKLMSLVTSLIEERSKPWNPNMVSDPVQEKLLEIIESKRKSAKKVAKPKA
KEGEPVHAGNVIDLMAALKGSLEKKKPGGKKS
NT seq 819 nt   +upstreamnt  +downstreamnt
atggcgcccccacgcccatactggaaaggctacctgaagctctcgctcgtcacctgcccc
gtctcgatgatgccggcgaccagcgagtccgagaaggtccgcttccacacgctcaaccgc
acgtccaacaaccgcgtcgtgtccaggtatgtcgatgcggtgaccggcaaggaggtcgac
gaagacgacgaggtgaaaggttacgagcgcggtgaaaacgatttcctcgtgatcgaggac
gaagagctggagagtgtcgctctcgaaagtgcgaggacgatcgacatcgagaaattcgtt
ccgcgcgatacgatcgaatggatctggctggagaagcctcactaccttacgccttcggac
gaagtcggccacgaagcattcagcgtgatccgcgacgccatggtagccgagaaggtcgcc
ggcatttcccggctcgtgatcggccgccgcgaacgagccgtgatgctggaaccgtgcggc
aaaggcatcgtcgtatggacccttcgctatggcgacgaggtgcgcaagccggagaactat
ttcgccgatatcggcgatggggataacgatccgaaactgatgagcctcgtcacctcgctg
atcgaagagcgcagcaaaccgtggaatcccaacatggtcagcgatcccgttcaggaaaag
ctgctcgaaattatagaaagcaagcggaagtcggcgaagaaggtagccaagccgaaagcc
aaggagggagagccggtccacgccgggaacgtcatcgacctcatggcggcgctcaaggga
agcctcgagaaaaagaaacccgggggcaagaagtcttga

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