Sinorhizobium kummerowiae: PZL22_000492
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Entry
PZL22_000492 CDS
T09063
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skm03032
]
PZL22_000492
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_000492
Enzymes [BR:
skm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PZL22_000492
DNA replication proteins [BR:
skm03032
]
Prokaryotic type
DNA Topoisomerases
PZL22_000492
DNA repair and recombination proteins [BR:
skm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PZL22_000492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WHS91880
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Position
pSkuCCBAU71714b:complement(548839..549981)
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AA seq
380 aa
AA seq
DB search
MARATSVDVLECPPCVIADGPRNLAAAGHVPEETGLVYVSDSEPGIRRQRRGKGFVYRMP
DGSIVTDPSIRSRIAALGLPPAYEDVWICLEERGHLQATGYDARGRKQYRYHREWQALRS
ADKFAQLVEFGKALPKIRRTIRRHMQGDVENMQTVLAALVALLDEAHLRTGNQAYVQANG
SYGATTLLKRHLRLGDGFIELKFIGKGGKRVQRLLRRPKLQQLLEEIADLPGRQLFVWKD
ENDALRPVDSGRLNRYLTDMAGAAVSAKTFRTWGGTLAAFTAARTSIEQGEWPTIKQMSE
AAASVLHNTPAISRSSYIHPDVLALADKSASISARQLQARGRLDSELRVEEQRLLSFLQR
SARSRARQAKSVAEERRASS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctagagcaacgtcggtcgacgtgctcgaatgtccgccttgcgtgatcgcggatggt
ccgcggaacctggcggcggccggtcacgtgcccgaggaaaccgggctcgtctatgtcagc
gacagcgaaccgggcatccggcggcaaaggcgtggcaaggggtttgtctaccgaatgccg
gacggctcgatcgttaccgatccgtcgatcaggagccgcatagcggcgctgggcctgccg
cctgcctatgaagacgtctggatctgcctcgaagaacgggggcatctgcaggccacgggc
tacgatgcacgcggacgaaaacagtaccgctaccacagggagtggcaggctctcaggagc
gccgataaattcgcgcaactggtggaattcggcaaggcattgcccaagatacgccgcacc
atacggcgccacatgcagggcgacgtggaaaacatgcaaaccgtgctcgctgcgctcgtg
gccttgctggacgaggcccatctgcgcaccggcaaccaggcttacgtgcaggccaatggg
agctacggtgccaccacgctgctgaagcggcatctcaggctgggcgatggcttcatagag
ctgaaattcatcggcaagggcggcaagcgcgtccagcgcctgctccgtcgccccaaattg
cagcagttgctggaagagatcgcggatctgccgggcagacagcttttcgtttggaaggat
gaaaatgacgcccttcggccggtcgattccggccggctcaaccggtacctcacggacatg
gccggtgcagccgtttccgcaaagacattccggacctggggcggcactctcgcggctttc
acggccgcccggacctcgatcgagcagggtgagtggccgacgatcaagcagatgagcgaa
gcggctgcgtcagttcttcacaacacgcccgccatcagccggagcagctacattcatccg
gatgtgctcgctctcgccgacaagtcggcctcgatctcggcacggcagcttcaggcgcgc
gggcgcttggatagcgaactgcgtgtggaggaacagcgcttgctgagttttcttcagcgc
tcggcgcgctcgagggcgcggcaggcaaaatcggtcgcggaagagcgacgagcttccagc
taa
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