Sinorhizobium kummerowiae: PZL22_000493
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Entry
PZL22_000493 CDS
T09063
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00500
Starch and sucrose metabolism
skm01100
Metabolic pathways
skm01110
Biosynthesis of secondary metabolites
Module
skm_M00565
Trehalose biosynthesis, D-glucose-1P => trehalose
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PZL22_000493 (glgX)
Enzymes [BR:
skm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PZL22_000493 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
WHS91881
UniProt:
A0ABY8T1X6
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All DBs
Position
pSkuCCBAU71714b:complement(549974..552070)
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AA seq
698 aa
AA seq
DB search
MNLTFSELDFMKPELGAEYTGQGTHFAVFSAHAEKIELCLFSEDGREETARMPLPKREGD
IWSGYIEGIGPGTLYGYRAHGPYDPHNGHRFNPNKLLLDPYAKLVAGELIWDDALFGYTI
GSPEGDLSFDERDSAPFMVKGVVQDPTFDWAGEEAIRRPWTETIIYEAHVRGMTMTHPGV
PDELRGTFLGMASDPIIEHLTKLGVSAIELMPVQYFLDDRYLVERNLRNYWGYQTLGFFA
PHERYLKGDRFTEFKTMVKRFHSAGIEVLMDVVYNHTAEGSERGPTLSFRGLDNFSYYRQ
SPDKPRHTYDTTGTGNTLNVAHPLVLRMVFDSLRYWVGVMHIDGFRFDLASTLGREYMEF
DREGGFFDAIRQDPILAGVKLIAEPWDVGEGGYQLGGFPPPFREWNDRFRDDVRRFWKGD
GGMVPVLAERILGSPVQFRHSDRAATSSINLVSAHDGFTLTDTVSYGEKHNEANGEENRD
GHSDNHSDNMGAEGPTDNGEIIEARKRRRAAMLATLMISQGVPMVLGGDELGNSQQGNNN
AYCQDNEIGWLDWSGADDGFVDFCRKLLAFRKEHPVLRQERFLDGEPEENGRVEIAWYKA
DGSPMDEDAWHDAELRLICAYICRVGQGEAPPAGEIVLVLNAGGDCEIALPHGNGSRRWL
RVLDTAADEPFGMRASADRNTIPAQSVVAFVPQEGGNG
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgactttttccgaactcgatttcatgaaacctgaactcggtgcagaatacacc
ggccaggggacgcattttgcggtcttctcggcgcatgcggagaagatcgagctctgcctg
ttttccgaggatgggcgcgaggaaacggcgcgcatgccgctgccgaagcgcgagggcgat
atctggtccggttacatcgagggtatcggtcccggcaccctctatggctaccgcgcccac
ggaccttacgacccgcacaatggtcaccgcttcaatccgaacaagctgctgctcgatccc
tacgccaagctggtcgcgggtgagctcatctgggacgatgccctcttcggctatacgatc
ggcagccctgagggcgacctttcctttgacgagcgcgacagcgcccccttcatggtgaag
ggcgtcgttcaggacccgactttcgactgggcgggcgaagaagcgatccgccgcccctgg
actgaaacgatcatctacgaggcgcatgtccgcggcatgaccatgacgcatcccggcgtg
ccggacgagctgcgtggcacgtttctcggcatggcgagcgatccgatcatcgagcacttg
acgaagctcggcgtttcggcgatcgaattgatgccggtgcagtatttcctcgacgaccgc
tacctggtggagcggaacctcagaaattattgggggtatcagacgctcggattcttcgct
ccccacgagcgctatctcaagggcgaccgctttaccgaattcaagacgatggtgaagcgg
tttcattccgccggcatcgaagttctgatggatgtcgtctacaaccatacggccgagggt
tcggaacgcggcccgaccttgagcttccgcgggctcgacaatttcagctattaccgccag
tcgccggacaagccgcgccacacctacgacacgacgggcaccggcaacacgctcaatgtt
gcccatcccctggtgctgcgcatggtcttcgacagcctgcgttactgggtgggcgtgatg
catatcgacggcttccgcttcgatctcgcaagcacgctcggccgcgaatacatggagttc
gatcgcgaaggcggctttttcgacgcgatccggcaggatccgattctggcgggtgtgaag
ctgatcgccgaaccctgggacgtcggcgagggcggctatcagctcggcggtttcccgccg
ccgttccgcgaatggaacgaccggttccgcgacgatgtccggcgcttctggaagggagat
ggcggcatggttccggtgcttgccgagcgcattctcggctcgccggttcagttcaggcat
tcggaccgtgccgcgacctcgtcgatcaacctggtgagcgcccatgacggcttcaccctg
acagacacggtctcgtacggcgaaaaacacaacgaggcgaacggcgaggagaaccgggac
gggcactccgacaatcattccgacaacatgggcgccgaaggcccaaccgacaacggagag
atcatcgaggcccgcaagcgacggcgggcggccatgctcgccaccctgatgatcagccag
ggcgtgccgatggtgctcggcggcgacgagctgggaaacagccagcagggcaacaacaac
gcctattgccaggataacgagatcggctggctcgattggagcggtgcggacgatggcttc
gtggatttctgccgcaagctcctcgccttccgcaaggaacaccctgtcctgcggcaggaa
cggttcctcgacggagagcccgaggagaatggacgggtcgaaatcgcctggtacaaggcg
gatggcagcccgatggacgaggacgcctggcacgacgctgagctccgcctgatctgcgcc
tatatctgccgcgtcgggcagggcgaagctccgccggccggcgagatcgtcctcgtgctc
aatgccggcggtgattgcgagatagccctgccccacggaaatggaagcaggcgctggcta
cgcgtgctcgacacggcagccgacgaaccgttcggcatgcgcgccagcgcggatcgcaac
actatcccggcgcagagcgtcgtcgccttcgtgccgcaggagggaggcaatggctag
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