Sinorhizobium kummerowiae: PZL22_001602
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Entry
PZL22_001602 CDS
T09063
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00541
Biosynthesis of various nucleotide sugars
skm01100
Metabolic pathways
skm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PZL22_001602 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
skm01005
]
PZL22_001602 (kdsA)
Enzymes [BR:
skm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PZL22_001602 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
skm01005
]
Lipid A
PZL22_001602 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WHS93924
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All DBs
Position
183086..183928
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AA seq
280 aa
AA seq
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MMETNSRVVVGEGAGQVVFSQKERLTLIAGPCQMESREHAFMIAGELVELCRSLGLGLVY
KSSFDKANRTSLSGKRGIGLDKAMEVFADLKREFGFPVLTDIHTEEQCAAVAETVDILQI
PAFLSRQTDLLVAAAKTGRTINVKKGQFLAPWDMKNVLAKFTESGNPNVLLCERGASFGY
NTLVSDMRSLPIMAALGAPVVFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGV
FVETHEDPDNAPSDGPNMVPLKDMPRLLEKLLAFDAVAKA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaccaattcaagggtcgtcgtcggcgaaggtgccggccaggtggtgttctcg
cagaaggaacggctgacgctgatcgccggaccctgccagatggagagccgcgaacacgcc
ttcatgattgcgggggagctcgtcgagctctgcagatcgctcgggctcggactcgtctat
aaatcttcgttcgacaaggcgaaccgcacctcgctttccggcaaacgcggcatcgggctc
gacaaggcgatggaggtcttcgccgacctcaagcgggagttcggttttccggtgctgacc
gatatccatacggaagagcaatgcgctgccgtggccgagaccgtcgacatcctgcagatc
ccggcctttctgtcacggcagacggatctgctcgtcgccgccgccaagacggggcggacg
atcaacgtcaagaagggccagttcctcgccccctgggacatgaagaacgtccttgccaag
ttcaccgagagcggcaacccgaacgtgcttctctgcgagcgcggcgcttccttcggctat
aacacgctggtctccgacatgcgctcgctgccgatcatggcggcactcggcgctccggtg
gtcttcgatgcgacccattccgtccagcagccgggcggccagggaggctccaccggcggc
cagcgtgagttcgtcgagacattggcgcgtgcggccgtcgccgtcggtgtcgccggtgtc
tttgtcgagacccatgaggatcccgacaatgctccctccgacggtcctaacatggtgccg
ctgaaggacatgccgcggctgcttgagaaactgctcgcctttgacgccgttgcgaaagcg
tga
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