Sinorhizobium kummerowiae: PZL22_001709
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Entry
PZL22_001709 CDS
T09063
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00260
Glycine, serine and threonine metabolism
skm00630
Glyoxylate and dicarboxylate metabolism
skm00670
One carbon pool by folate
skm00785
Lipoic acid metabolism
skm01100
Metabolic pathways
skm01110
Biosynthesis of secondary metabolites
skm01200
Carbon metabolism
Module
skm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PZL22_001709 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PZL22_001709 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PZL22_001709 (gcvP)
00670 One carbon pool by folate
PZL22_001709 (gcvP)
Enzymes [BR:
skm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PZL22_001709 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
M-HEAT_ATR
Motif
Other DBs
NCBI-ProteinID:
WHS94026
LinkDB
All DBs
Position
complement(300745..303609)
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AA seq
954 aa
AA seq
DB search
MSMPKDFTFTDYKPYDFANRRHIGPSPAEMDEMLKVVGYPSLDALIDDTVPPSIRQRTPL
AWGAPMTEREALDKLRETANRNRKLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMVCDLTGLDVANASLLDEATAAAEAMAIAERVAKSKAKAFFIDE
NCHPQTIALLKTRAEPLGWQIVVGDPFEDLDAAGVFGAIFQYPGTYGHVRDFSGLIAKLH
GQGAIAAVAADPLALALLKSPGEMGADIAIGSTQRFGVPVGYGGPHAAYMAVKDAYKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPDGI
KAIAQSVHQKTVRLAMGLEKLGYTVEPDVFFDTITVEVGKLQGIILKAAVAEEVNLRKIG
TTRIGISLDERSRPVTLEAVWRAFGGDFKVEEFEPDYRLPQELLRTSAYLTHPIFHMNRA
ESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQALG
YQHLIEDLSQKLCAITGYNAISMQPNSGAQGEYAGLLAIRAYHIANGNEHRDVCLIPTSA
HGTNPASAQMAGMKVVVVKVSDAGEIDMDDFRAKAEQYADTLSCCMITYPSTHGVFEENV
REVCEVVHKHGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHPQTDGHEGAVSAAPFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYVAARLKGAYDVLYKSAKGRVAHECIIDTRPLAESAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCDAMLAIREEARAIEDGRMDKVNNPLKNAPHTVEDLVG
DWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLVCTCPPIESYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcccaaggactttaccttcaccgattacaagccttacgacttcgccaatcga
cgtcacatcggcccttcgccggccgagatggacgagatgctgaaggtcgtcggctatccg
agcctcgacgcgctcatagacgacaccgtgccgccgtcgatccgccagcggacgccgctt
gcctggggcgcgccgatgaccgagcgcgaggcactcgacaagctgcgcgagacggcgaac
cgcaaccggaagctcgtctccctgatcggtcagggctactacgggaccatcaccccgccg
gtcatccagcgcaatatcctcgagaatccggcctggtacaccgcctatacgccctatcag
ccggaaatcagccaggggcggctggaagccctgctcaactaccagaccatggtttgcgat
ttgaccggcctggacgtcgcgaacgcctcgttgctcgacgaggcgacggcggcagccgaa
gcaatggccattgccgagcgcgtcgcaaagtccaaggcgaaggcgtttttcatcgatgag
aactgccatccccagacgattgcgctcctgaagacccgggcggagccgctcggctggcag
atcgtcgtcggcgatccgttcgaggatctggacgctgccggcgtcttcggcgcgattttc
cagtaccccggtacctacggccatgtccgcgacttctcgggcctgatcgccaaactccat
gggcagggggcaatcgccgccgtagcagccgatccgctggcgctggcgcttctgaagtct
ccgggtgaaatgggcgccgacatcgcgatcggttcgacccagcgcttcggcgttccggtc
ggctacggcggaccgcacgccgcctatatggcggtcaaggatgcctataagcgctccatg
cccggccgcctcgtgggcgtgtcggtcgatgcgcggggcaaccgcgcctaccggctgtcg
ctccagacccgtgaacagcatatccggcgcgaaaaggcgacatcgaacatctgtaccgcg
caggtgctgcttgccgtcatggcctccatgtatgcggtcttccacggtccggacggaata
aaggcgatcgcccagagcgtgcaccagaagacggtccggcttgccatgggattggagaag
ctcggctataccgtcgagccggatgtcttcttcgatacgatcaccgtcgaagtcggcaag
ctgcaaggcatcatcctcaaagccgccgtggccgaggaggtaaaccttcgcaagatcggc
acgaccaggatcggcatcagtctcgacgagcgttcgaggccggtcacgctcgaggccgtc
tggcgcgccttcgggggcgatttcaaggtcgaggagttcgagccggactaccgcctgccg
caggaactgctgcgcaccagcgcctatctcacccatccgatcttccatatgaaccgcgcc
gagagcgagatgacgcgttacatgcgccgcctcgccgatcgcgatcttgcgctcgaccgc
gcgatgatcccgctcggctcctgcacgatgaagctcaacgcgaccgcggagatgctgccg
atcacctggccggagttctcggaaatccatcccttcgtgccggccgaccaggcactcggc
tatcagcatctcatcgaagacctgtcgcaaaagctgtgcgcgatcaccggctacaatgcg
atctcgatgcagccgaactcgggtgcccagggtgaatatgccggtctgctcgcgatccgc
gcctaccatatcgccaacggcaacgagcatcgcgacgtctgcctgataccgacctcggcg
cacggcaccaacccggcctcggcgcagatggccggcatgaaggtggtggtcgtcaaggtg
agcgacgccggcgagatcgatatggacgatttccgcgccaaagcggagcagtatgcggac
accctctcctgctgcatgatcacctatccctcgacgcacggcgtgttcgaggagaacgtc
cgcgaagtctgcgaggtcgtgcataagcacggtggccaggtctatctggacggcgccaac
atgaatgcgatggttggcctttcccgccctggcgacatcggctcggatgtcagccatttg
aacctgcacaagaccttctgcattccgcatggcggcggcggtcccggcatgggcccgatc
ggcgtcaagtcgcatctcgcccccttccttccgggacacccgcagaccgacgggcacgag
ggcgccgtatccgccgcaccgttcgggtcggcctcgatcctgccgatctcctggagctac
tgcctgatgatgggcggcgaaggcctgacgcaagcgaccaaggtggcgatcctcaacgcc
aattacgtcgccgcccggctgaagggtgcctatgacgtgctctacaagtcggcgaaaggc
cgggtcgcgcatgaatgcatcatcgatacccgtccgctcgccgaaagcgccggcgtcacg
gtcgatgacgtcgccaagcgcctgatcgactgcggcttccatgcaccgacgatgagctgg
ccggtcgcgggcacactgatgatcgaacccacggaatcggaaacgaaggccgagctcgac
cgcttctgcgacgccatgctggcaatccgcgaagaggcccgcgccatcgaggacggccgg
atggacaaggtcaacaatccgctgaagaacgcgccgcatacggtcgaggacctcgtcggc
gactgggaccggccctattcgcgcgagcaggcctgcttcccaccgggcgccttccgcgtg
gacaaatactggtcgccggtcaaccgtgtcgacaatgtctatggcgaccgcaatctcgtc
tgcacctgcccgccgatcgagagctacgcggaagcggcggaatga
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