Sinorhizobium kummerowiae: PZL22_002016
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Entry
PZL22_002016 CDS
T09063
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skm03000
]
PZL22_002016
Transcription factors [BR:
skm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PZL22_002016
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
KfrA_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WHS94303
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Position
complement(616641..617879)
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AA seq
412 aa
AA seq
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MIAMDINLRHLRVFMQVCETGSLNRAAAELHISQPSVSVALAGIERRFGAKLLSRYAAGS
QPTAAGEVLLMRLRRMENQIASALAELFGVSSQRDPTLVAKCLARIGFRQIEALIALSGS
GSITEAARSGGGSPAALHRALHDLQTNIGRAILMRSPAGVAPNALGRRLAIRWQVALTEL
EQALDEIRENEGRMEGRIKIASLPLARTLLLARAVNPLMAAHPNARVEVMDGSYEALSQQ
LRTGASDILIGALRSGSDLEGLRAEPLFEDPYAVVGRSGHPLLNSDGKGASLDQLAAQQW
VAQRPGTPIRAAFDALFAGCRDAPRASIETSSLVLTRAIILESDRLSMLSRRQIAIEERE
NLLGCVPVADEVRSRLRTRTIGITVRENWLPSRLQKTFLECLRVAAAGLGQA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaatggatatcaacctccggcatctgcgggtcttcatgcaggtctgcgagacg
ggcagcctcaaccgggcggccgccgagctgcacatttcacaaccctccgtctcggttgcg
ctggcgggtatcgagcgccgcttcggcgcgaaactcctgtcacgctatgctgccggcagt
cagccgacggcggccggcgaggttctcttgatgcggcttcgccgcatggagaaccagatc
gcctcggcgctggccgaactcttcggcgtgagttcgcagcgagacccgacgctggtcgcc
aaatgtctcgcccggatcggctttcggcagatcgaggcgctgatcgccctttccggcagc
ggttcgattaccgaggccgcgcgcagcggcggcggctcgccggcagcgctgcaccgggcc
ttgcacgacctgcagaccaatatcggcagggccatccttatgcgcagtccggccggcgtg
gcgccgaatgcgctaggccgccgccttgcgatccgctggcaggtcgctctcaccgaactg
gagcaggctctggatgaaatccgtgaaaacgaggggcgcatggaggggcggatcaagatt
gcaagtcttccgcttgcgcgcaccctgttgcttgcgcgcgccgtcaacccgcttatggcg
gctcacccgaatgctcgggtggaagtcatggatggctcttacgaggctctgtcgcagcag
ttgcgcaccggcgcgagcgacattctgatcggagcgctgcgttcgggcagcgacctcgag
ggactgcgggcggagccccttttcgaggacccctatgcggtcgtcggacgatccgggcac
ccgcttctcaacagcgacggcaagggcgcatcgcttgaccagctcgccgcccagcaatgg
gtcgcccagcggcccggcacacctatccgggccgcattcgacgcgctctttgctggttgc
cgggatgcgccaagggcgagcatcgagacgagctcgctcgttctcacgcgtgccatcatt
ctggaaagcgaccggctgtcgatgctctctcgccgccagatcgccatcgaggaaagagaa
aaccttcttggctgcgttccggtcgccgacgaggtgcgcagccggctccggacgcgaacc
atcggtatcaccgttcgggagaactggttgccgagcaggcttcagaaaacttttctggaa
tgcctgcgcgtcgcggcagcgggtctcggccaggcgtga
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