Sinorhizobium kummerowiae: PZL22_003644
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Entry
PZL22_003644 CDS
T09063
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_003644 (addB)
Enzymes [BR:
skm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZL22_003644 (addB)
DNA repair and recombination proteins [BR:
skm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PZL22_003644 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WHS92573
LinkDB
All DBs
Position
complement(2343204..2346383)
Genome browser
AA seq
1059 aa
AA seq
DB search
MPGHPNVFTIPAGLPFLRTVAERLCNGELTPGFRYDPAQPLALAGVTIFVPTRRSARVLR
SEFVDLLGGRSAILPMIRALGETDDDSGFFDAEVPAILDLAPPLSGTARLIELGRLILAW
RNRLPQVVLDIHAESPLIAPASPADAIWLARNLAELIDAIETEELDWDALDGLDGGEHAL
WWQLTLAFLKIARTYWPERLTELKHSSPARHRNAVLKAETQRIAAGKVSGPIIIAGSTGS
IPATAALIAAVKALPNGTIVLPGLDGSMSDAEWRLIAGETSGSGTSARNPASRTHPQYGF
HRLLKRMGIERGDVPALASAADDLDYRSAVLSRALLPADATDVWMEARRSFDAERLLSAF
ADVALIEAANEREEATAIAIALRLALEADEESQAALITPDRGLARRVGTELARFGIEADD
SAGIPLSATPAGALARLLLEATLRPDDPVALVALLKHPLARFGQTADDARRAADVLELAA
LRGGTDAADISALEAVLDKALDRQKTDRHPPPWRAGIGPDDIAMARALARRIASAVGPLS
STLSADPQTGRHRSTVLPLSDWAERTGRALEAAAIGEQGNLGALWASEAGEILATLLRGI
IETDGQMEADGPQWCDILEALAASEAVKPRSMRHPRVFIFGALESRLQSVDLVVLGGMNE
GTWPGQTSNDPFLSRTMKAGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTV
ASRWLQRLQALGGERLTALLKANGADYLHWMRILDQGERQPLSERPEPKPPAELQPRKYS
FSEVTRLRRDPYAVYARRILRLEPIQPFNRDPGAAERGLLYHRIVDRFVKGGFDPAAREG
EEAMIRLTDEAFDEEKLPAHIDTIWRPRFQAVGRAFLEWERERRHGIVKSFTEVPAAMDL
GIGDIRLTGIADRLDRLADGTIDIIDYKTGSSPSPKEARALLDPQLALEAAALRAGAFRV
IGPAQPHSLRYVRLKPGSRFAVDTVNNEGARSKETKSTGQLADESLAELRKLLSALMSGK
FGFASRLIVQKQRDYGGEYDHLARVAEWATADGEDDDEE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggacatccgaacgtcttcacgattccagccggcctgccctttctgaggacggtc
gcggaaaggctctgcaatggcgagctgacccctggcttccgctacgatccggcgcagccg
ctggcactggccggtgttacgatcttcgtgccgacccggcgctccgcccgcgtgctgcgt
tcggaattcgtcgatctgctcggcggccgttcggcgatcctgccgatgatccgggcgctc
ggcgagaccgacgacgacagcggcttcttcgacgccgaggtgccggcgatcctcgacctc
gcgccgccgctttccggaacggcacggctcatcgaactcggccgcctcattctcgcctgg
cgaaaccgcctgccgcaggtggtcctcgacatccacgcggaaagcccgctgatcgctccg
gcaagccctgccgatgccatctggctcgcgcggaacctcgccgaactcatcgatgcgatc
gagaccgaggaactcgactgggatgccctcgacgggctcgacgggggcgaacatgcgctc
tggtggcaactgacgctcgccttcctcaagatcgcccgcacctattggccggagcggctg
accgaactcaagcactcctcgcccgcacgccaccgcaatgcagtgctgaaggccgagacc
cagcgtatcgccgccggcaaagtgagcggaccgatcatcatcgccggttcgaccggttcg
atcccggcgacggccgcactgatcgccgcggtcaaggcgctgccgaacggtacgatcgtg
ctccccggcctcgacggatcgatgagcgatgcggagtggcggctgatcgcgggagagacg
tccggctccggcacttctgcaaggaacccggcaagccgcacccacccgcaatatggattt
caccgtctgctcaagcgcatgggcatcgaacgcggggacgtgcccgccctcgcgagcgct
gccgatgatctcgactatcgcagcgcggtcctttcgcgggcgctgttaccggccgacgcg
actgacgtctggatggaagcccgccggagcttcgatgcggaaagactcctctccgccttt
gcggatgtggcgctgatcgaagcggcgaacgaacgcgaagaggcaaccgccatcgcgatc
gcgcttcggctcgcgctcgaagccgacgaggagagccaggcggcgctcatcacccccgat
cgaggccttgcgcgtcgggtcggcaccgagcttgcccgcttcggtatagaggcggacgat
tccgccggcattccgctctcggcgacgccggcgggcgcacttgcccggctgctgctggag
gcaacgctcaggccggacgacccggtcgccctggtcgcactcctcaagcatccgctggcg
cgcttcggccagacggcggacgatgcgcgccgagctgcggacgtgctggagctcgcggcc
ctgcgcggcggcaccgatgcggccgacatttcggccttggaagcggtcctcgacaaggcg
ctcgacaggcagaagaccgaccggcacccgccgccttggagagcgggtatcggcccggac
gatatcgccatggcgcgcgcactcgcacgccggatagcctcggcggtcggccccctgtcc
agcactctctctgccgatccgcaaaccggccgtcaccgctcgaccgtgctgcccctttcg
gattgggcggagcgtacggggcgcgctctggaggcggccgccatcggagagcaaggcaat
ctcggcgccctctgggcttcggaagccggcgaaatattggcgacgctcctcaggggcatc
atcgaaaccgatggccagatggaggccgacgggccgcaatggtgcgacattctcgaggcg
cttgccgcaagcgaagccgtcaagccgcggtcgatgcgccatccccgcgtcttcattttc
ggagcgctcgagtcgcgcctgcaaagcgtggacctcgtggtgctcggcggcatgaacgag
ggcacctggcccgggcagacgtcgaacgatccgttcctttcgcgaacgatgaaggcgggt
atcggtctggagccgccggagcggcggatcggccagctcgcgcatgatttccagatggcc
tgcggcacccgccggctgatcctttcgcgctccatgcgtcagggatccgcgccgacggtg
gcttcccgatggctgcagcgccttcaggcgctcggcggcgagaggctgacggcgctgctc
aaggcaaatggcgccgactatctccactggatgcgcattctcgaccaaggcgagcgtcag
ccgttgtcggagcggccggaacccaagcctcccgcggagctgcagccccgaaaatattcc
ttcagcgaagtgacgcggctgcgccgcgatccctatgccgtctacgcgaggcgcattctc
cggctggaaccgatccaaccgttcaaccgcgacccgggtgcggccgaacgcggcctgctc
tatcaccggatcgtcgatcgattcgtgaagggcggcttcgacccggcggcgcgcgagggc
gaggaagcgatgatccggctcaccgacgaggccttcgacgaggagaaactgcctgcgcat
atcgacaccatctggcggccacgcttccaggcggtcggaagggcgttcctcgaatgggaa
cgggagcgccggcacggcattgtgaaatcgttcaccgaggtaccggcggcaatggatctc
ggcatcggcgatatccggctgaccggcatcgccgatcgtctggatcgcctggcggacgga
acgatcgacatcatcgactacaagaccggatcgagcccctcgcccaaagaggcacgggcg
cttctcgacccgcagctggcgctcgaggcggcggcgctcagggccggggcattccgtgtg
atcgggccggctcagccgcactcgctgcgctatgtccggctgaagccggggagccgattt
gccgtcgacactgtcaacaacgagggcgcccgttcgaaggagacgaaatccaccggacaa
ctggcggacgagtcgctcgccgagctccgcaagctgctttccgcgcttatgagcggcaag
ttcggcttcgcctcgcgcctgatcgttcagaaacaacgcgactacggcggggaatacgat
catctggcgcgcgtcgccgaatgggcgaccgcagatggcgaggacgacgatgaggagtga
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integrated database retrieval system
