Sinorhizobium kummerowiae: PZL22_003719
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Entry
PZL22_003719 CDS
T09063
Name
(GenBank) DUF1989 domain-containing protein
KO
K00605
glycine cleavage system T protein (aminomethyltransferase) [EC:
2.1.2.10
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00260
Glycine, serine and threonine metabolism
skm00630
Glyoxylate and dicarboxylate metabolism
skm00670
One carbon pool by folate
skm00785
Lipoic acid metabolism
skm01100
Metabolic pathways
skm01110
Biosynthesis of secondary metabolites
skm01200
Carbon metabolism
Module
skm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PZL22_003719
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PZL22_003719
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PZL22_003719
00670 One carbon pool by folate
PZL22_003719
Enzymes [BR:
skm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.10 aminomethyltransferase
PZL22_003719
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GFIT
Motif
Pfam:
GCV_T
DUF1989
GCV_T_C
Motif
Other DBs
NCBI-ProteinID:
WHS92639
LinkDB
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Position
complement(2423809..2426178)
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AA seq
789 aa
AA seq
DB search
MENRRPGMLGGRPVSASIIRYPGIPALPKDTERYRCKGGGSLVVRVEAGDLVTVTDAEGG
QACELSFVDESGRFQAAGLGAAFTNAAEGLKTILSREEAGTLRIRSALRRRGADLATAGA
LRIFGERSTPGSRVEFTIAVKGLLIVAAPAEAMSPEAQDTATPIEVRVRRSRVVRDYSSA
LPEPLADPIEDIRIKAATASAYFVRAGEFIQIIDVYGRQCTDFQAFAARKVDKGLDLALD
STVTRTLLGRSYPAPGLPSKAFDRDFEPLVEIVQDTVGRHDAFATACNSRYYDDMGYPGH
VNCTDNFNAALAPYGIPGRKGWEALNYFYNTDIDHNNQLYLDEPWSRPGDYVLMRALTDL
VCVSSSCPDDIDAANGWDPTDIHVRTFSGKEQFSRAVAYRMTPDADPELTRETAFHPRFS
ALTRDYAEYRGYWLPNRFSSAGPVEEYWACRERAAVIDLSPLRKFEVTGPDAEELLQYCL
TRDVRKLSTGQVVYSAMCYEHGGMIDDGTLFRLGDKNFRWIGGDDYSGIWLREQAEKKGF
RAWVRSSTDQMHNIAVQGPKSRDILKEIVWTAPRQPTIGELEWFRFAVGRIGGFEGAPIV
VSRTGYTGELGYEIFCHPKDALTVFDAVWRAGEPHGLRPMGLEALDMVRIEAGLIFAHYD
FDDQTDPFEAGIGFTVPLKSKHDDFIGREALIRRKENPRHLMVGLDIQANEAVGHGDCVH
VGRAQIGVITSATRSPVLGKTIALARIDVTHATVGTQVEIGKLDGQQKRLPAIVVPLSHY
DPQKKRPRS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcgccgtcctgggatgcttggggggaggcccgtttcggcgagcatcatccgc
tatccgggcattccggcgctgccgaaggacactgaacgataccgatgcaagggtggcggc
tcgctggtcgtacgcgtcgaagcgggagacctggtgacggtcaccgatgcggagggcggc
caggcatgcgagctttccttcgttgacgaaagcggccgcttccaggcggcaggcctcggc
gcggcgttcaccaatgccgccgagggcctcaagaccattctctcccgcgaagaagcgggc
acgctgcgcattcgaagcgcgcttcggcgccgcggtgcggatctggccacggccggcgcg
ctccgcatcttcggggaacggtccacgccgggcagcagggtcgaattcacgatcgcggtg
aaggggctgctgatcgttgccgcacccgcagaggcgatgtcgcccgaggcacaggacacg
gcaacgcccatcgaggtcagggtccgccgcagcagggtggtccgcgactattcctccgcc
ttgccggagccgcttgccgatccgatcgaagacatccgcatcaaggctgcaaccgcttcg
gcgtatttcgtgcgggccggagaattcatacagatcatcgacgtctatggccgccagtgc
acggactttcaggcctttgccgcccgcaaggtcgacaagggcctcgacctggctctcgac
tcaaccgtcacccgtaccctgctcgggcgcagctacccggcgccgggcctgccctccaag
gctttcgatcgcgatttcgagccgctggtggagatcgtgcaggacacggttggccgtcac
gacgctttcgccaccgcctgcaattcgcgctattacgatgacatgggctatcccggccac
gtcaactgtaccgacaatttcaacgcggcgcttgcgccttatggcattcccggccgcaag
ggctgggaggcgctcaactatttctacaacaccgatatcgaccacaacaatcagctctat
ctcgatgagccctggtcgcgtccgggcgactacgtgctgatgcgggccctgaccgacctc
gtctgcgtctcctcctcctgccccgacgatatcgacgcggcaaacggctgggatccgacc
gacatccacgtccggaccttttccggaaaagagcaattctcacgagcggtagcctatcgc
atgacacccgatgccgatcccgaactgacgcgtgaaaccgcctttcacccccgtttctcg
gcgctgacgcgagactacgctgaatatcgcggctattggctgccgaaccggttttcgtcg
gcggggccggtcgaggaatactgggcctgccgggaaagggcggcagtgatcgatctctcg
cctttgcgcaagttcgaggtcaccggtccggatgccgaggaattgctgcaatattgcctg
acgcgcgacgtgcgcaagctttcgaccgggcaggtcgtctattccgcgatgtgctacgag
catggcggcatgatcgacgacggcacccttttccgcctcggcgacaagaacttccgctgg
atcggcggggacgattacagcggcatctggctgcgcgagcaggcggagaagaaaggcttc
agggcctgggtgcgttcctcgaccgatcagatgcacaatattgccgttcagggcccgaag
agccgcgacatcctcaaggagatcgtttggacggcaccgcgtcagcccacgatcggcgag
ctcgaatggttccgtttcgcggtcggtcgcatcggaggcttcgagggggcgcccatcgtc
gtctcgcgcaccggctataccggcgagctcggctacgagatattctgtcacccaaaagac
gccctgaccgttttcgacgcggtctggcgggccggcgagccgcatgggctgaggccgatg
gggctggaagcgctcgacatggtccgcatcgaggcgggcctgatcttcgctcattacgac
ttcgacgatcagaccgacccgttcgaggccggtatcggcttcacggtgccactgaagtcc
aagcatgacgatttcatcggccgcgaagcgctgatccgccgcaaggaaaacccgcgccac
ttgatggtcggcctcgacatacaggcgaacgaggcggtcggccacggcgactgcgtgcat
gtcggacgcgcgcagatcggcgtcatcaccagtgccacccgctcaccggtcctcggcaag
acgatcgcgcttgcccggatcgacgttacgcatgcgacggtcggtacgcaggtggagatc
ggcaagcttgacggccagcagaagcgcctgcccgcaatcgtcgtgccgctgtcgcactac
gatccgcagaagaagcggccgcgctcctga
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