Sinorhizobium kummerowiae: PZL22_003857
Help
Entry
PZL22_003857 CDS
T09063
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skm03016
]
PZL22_003857 (truB)
Enzymes [BR:
skm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PZL22_003857 (truB)
Transfer RNA biogenesis [BR:
skm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PZL22_003857 (truB)
Prokaryotic type
PZL22_003857 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WHS92773
LinkDB
All DBs
Position
2576110..2577045
Genome browser
AA seq
311 aa
AA seq
DB search
MSRPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVAWGEERSTDDLEGEAVRSSAARPEEEAIRALLPKYTGVI
AQVPPQFSAIKIGGERAYDLARDGETVEIPAREVEVFRLSLIGSAPNLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEEDMVPLADLVALEAIEDDAERLAALDAYL
IDTGEALSDLPHIAVNDDQAHRLRMGNPIILRGRDAPLPTPEAYATAQGKLVAIGEIAEG
EFRPKRVFATQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccccgcaaaccgaagggccgcccgatttcgggatggctgatcctcgacaaa
cccctcgatttcggttcgaccgaggccgtatccaagatcaagtggctgttcaaggcgcag
aaggcgggccatgccggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgacgcgacgaaaaccgttccttacgtcatggacggccgcaagatctacgaattcacg
gtggcctggggcgaggagcgctccaccgacgatctcgaaggcgaagccgtccgctcttcc
gccgcgcgtccggaggaagaggcgatccgcgccctgctgccgaaatataccggcgtgatc
gcgcaggtgccgccgcagttctctgcgatcaagatcggcggcgagcgcgcctatgatctc
gcccgcgacggcgaaaccgtcgagatcccggcgcgcgaggtggaggtcttccgtctgtcg
ctcatcggatcggctccgaatctcgctcatttcgagatcgaatgcggcaagggcacctat
gtccgttcgctcgcccgcgacatgggccgcgatctcggctgcttcggccatatcgcgtcg
ctgcgccgaaccttcgtcgcccccttcggcgaggaggacatggtgccgctcgccgatctc
gtcgccctggaggcgatcgaggacgatgcggaacgtctcgccgcgctcgacgcgtatctg
atcgacacgggagaggccttgtccgacctgccgcatatcgccgtcaacgacgaccaggcg
caccggctgcggatgggcaacccgatcatcctgcgtggacgcgacgctccgctgcccacg
ccagaggcctatgccacggcccaaggcaagctcgtggcgatcggcgaaatcgccgagggc
gagttccggccgaagcgagttttcgccacccaataa
DBGET
integrated database retrieval system
