Sinorhizobium kummerowiae: PZL22_004003
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Entry
PZL22_004003 CDS
T09063
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skm03032
]
PZL22_004003
03036 Chromosome and associated proteins [BR:
skm03036
]
PZL22_004003
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_004003
DNA replication proteins [BR:
skm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PZL22_004003
Chromosome and associated proteins [BR:
skm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PZL22_004003
DNA repair and recombination proteins [BR:
skm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PZL22_004003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Regnase_1_C
Motif
Other DBs
NCBI-ProteinID:
WHS92910
LinkDB
All DBs
Position
2718545..2718856
Genome browser
AA seq
103 aa
AA seq
DB search
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDSVFVEEKWVPFFKTGKELRERLNPGMNDNNNGEDD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagtcagagctggtgcagattgtggcggcgcgcaatccgcatctctatcaccgc
gatgtcgagaatatcgtcaatgcggtactcgatgagatcacggacgcgcttgctgccggc
aaccgggtggagctgcgcggtttcggcgcattctcggtcaagaaccggccatcacggtca
ggccgcaacccacgcaccggcgattccgtcttcgtcgaagaaaagtgggtgcccttcttc
aagaccggcaaggaactgcgtgagcggctcaatccgggcatgaacgacaacaataacggc
gaagacgactga
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integrated database retrieval system
