Sinorhizobium kummerowiae: PZL22_004173
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Entry
PZL22_004173 CDS
T09063
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm02024
Quorum sensing
skm03060
Protein export
skm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PZL22_004173 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PZL22_004173 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PZL22_004173 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
skm02044
]
PZL22_004173 (secD)
Secretion system [BR:
skm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PZL22_004173 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
WHS93074
UniProt:
A0ABY8T593
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All DBs
Position
2907136..2909670
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AA seq
844 aa
AA seq
DB search
MRTSRWAVLAYVAIIIFGCLAALPSVLTPAMREQVASVLPFEPVTLGLDLRGGSHLVLEV
DGAGLQKARLNSLLDDTRRVLRGERVSASSARISGNSVTVSIPDAQDRDKVLPKLQELAT
PVSTVGFAAPAPEVEVTTAGDVITLAMTEAGLADRMTKAVEQSLEIIRNRVDQVGVAEPL
IQRIGSNRILVQLPGLQDPTRLRELLGSTAQMSFHMLDQSVDVTQPAPRGVDILPGANDG
NRYPVESRVAISGERLDDAKVGFDQRTNQPVVDFSFDSLGARQFADITRENVGRPFAIVL
DGKVLTAPVINEPILGGRGQISGSFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGS
DSIRMGLFTGLAGFGLVVVLMVVLYGAWGMIANVGLVLHTIMTIGVLGLIGSTLTLPGIA
GIILGIGMAVDANILINARIREETEAGAGAMKALDIGFNKAYATIIDSNVTTLAGTVLLF
WFGSGPVKGFAVTMMLGIGISMFTSVTVVRLLMREVVVRRKMKKLEIPSLFGKVPQLPTF
SFMKGRFLAIGFSAFLSISSVILFFTPGLNYGIDFIGGIQVEAVSKEKINLPTLRQSLEE
LNLGEVALQDFGGGQSVLIRVQRQPGGEQAQTVALNKVKDAVTTALPGASMERTEVVGPT
VSGELARSGFLAVALAMLAILLYIWFRFEWHFAVGAIAVLLLDITKTVGFFALTGIDFNL
TAIAALLTMIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDMSINQVIARCIFTSAATAL
SLVPMAIWGGEAVQSFAWPMIFGVIVATTSSIYIGGPILLFLSRWWKEREAARSAGQQAE
TPTA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatccagatgggcggtcctcgcctatgtcgcgatcatcatcttcggatgcctt
gcggcgctgccgagcgttctgacgccggccatgagggagcaggtcgcttccgttctcccg
ttcgagccggtcacgctcggcctcgatctgaggggcggttcgcacctcgttctcgaggtg
gacggggcggggctgcagaaggctcgcctcaactcgcttctcgacgatacccgtcgcgtc
ctgcgcggcgagcgcgtttccgcttcctcggcgcgcatcagcggcaacagcgtgaccgta
agcatccccgatgctcaggaccgggacaaggttctgccgaagctgcaggaactggcgacg
cccgtgagcacggtgggtttcgccgccccggctcctgaggtcgaggtaacgacggcgggc
gatgtcatcaccctggcgatgaccgaggcgggtcttgccgaccgcatgaccaaggcggtc
gagcagagcctggaaatcatccgcaaccgcgtcgaccaggtcggcgtcgccgaaccgctg
atccagcgcatcggttccaaccgcattctggtccagctgcccggccttcaggatccgaca
cgcctgcgcgagcttctgggttcgacggcacagatgagcttccacatgctcgatcagagc
gtcgacgtcacacagccggcgccgcgtggggtcgacattctgccgggcgccaatgacggc
aaccgctatccggtcgaaagccgcgtcgccatttccggcgagcggctggacgacgccaag
gtcggcttcgatcagcgcaccaaccagccggtcgtcgatttcagcttcgactcgctcggt
gcccgccagttcgccgacatcacacgcgaaaacgtcggccggccgtttgcgatcgtgctt
gacggcaaggtgctgacggcgccggtcatcaacgagcccattctcggtggccgcggccag
atcagcggcagcttcacggtcgaggaggcgacggttctttccgcactcctgcgctccggt
gcgctgccggcaccgctgacgatcatcgaagagcgctcggtcggcccgaatctcggcagc
gactcgattcgcatgggcctctttaccggtctcgccggtttcggcctcgtcgtggtcctc
atggtcgtcctctacggggcctggggtatgatcgccaatgtcggcctggtgttgcacacg
atcatgacgatcggcgtactcggcctcataggttcgacgctgaccttgcccggtatcgcc
ggtatcattctcggcatcggcatggccgtggacgcgaacatcctgatcaatgcgcgtatt
cgcgaagagaccgaggcgggcgccggcgcgatgaaggcgctggatatcggcttcaacaag
gcttatgcgacgatcatcgactccaacgtcacgacgcttgcgggcacggtgcttctcttc
tggttcggcagcgggccggtgaagggctttgccgtcaccatgatgctgggcatcggcatt
tcgatgttcacatcggttacggtcgtgcgcctgctgatgcgcgaagtcgtcgtgcgccgc
aagatgaagaagctggaaatcccgtcgctttttggcaaggtgccgcagctgcccaccttc
tccttcatgaagggccgcttcctcgcgatcggcttttcggcattcctgtcgatcagctcc
gtcatcctgttcttcacgccgggtctcaactacggcatcgatttcatcggtggcattcag
gtcgaggcggtttcgaaggagaagatcaatctgccgacactgcgtcaaagcctcgaggag
ctcaatctcggcgaggtggcgctccaggacttcggcggcggccaatcggtgctgatccgc
gtgcagcggcagccgggcggcgagcaggcgcagacggtggcactgaacaaggtcaaggat
gcggtgacgaccgccctccccggtgccagcatggagcggaccgaggtcgtcggtccgacg
gtcagtggcgaactggcgcgatccggcttcctcgccgtcgccctcgccatgttggcgatc
ctgctctacatctggttccgcttcgaatggcacttcgccgtcggcgcgatcgccgtgctc
ttgctcgacatcaccaagaccgtcgggttctttgcactcacgggcatcgacttcaacctg
accgcgatcgcagcgctgctgacgatgatcggctattcggtgaacgacaaggtggtggtc
tacgaccgcatgcgcgaaaacctgcgcaagtacaagtcgatgccgttctccgatctcatc
gacatgagcatcaaccaggtgatcgcgcgatgcatcttcacctcggctgcaacggcgctt
tcccttgtgccgatggcgatctggggcggcgaggcggtgcagagcttcgcctggccgatg
atcttcggcgtcatcgtcgcgacgacctcgtccatctatatcggcggtccgatcctcctg
ttcctgagccgctggtggaaggagcgggaagccgctcgttccgccgggcagcaggcggaa
acgccgacggcctga
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