Sinorhizobium kummerowiae: PZL22_004411
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Entry
PZL22_004411 CDS
T09063
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skm03009
]
PZL22_004411
Enzymes [BR:
skm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PZL22_004411
Ribosome biogenesis [BR:
skm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PZL22_004411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WHS93298
LinkDB
All DBs
Position
3151277..3152998
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AA seq
573 aa
AA seq
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MTSKDKPTRPGGKAKGRDKKPHSGSEKPAARAAGSGPAAPTGADEPQRISKILSRAGVAS
RRDVERMIMEGRVSLNGVVLDTPVVNATLADRIEVDGHPIRGIERTRLWLYHKPGGLVTT
NADPEGRPTVFENLPEELPRVLSVGRLDINTEGLLLLTNDGGLARVLELPSTGWLRRYRV
RAHGEIDQEALDRLKEGIAVDGVLYGAIEATLDRVQGSNVWITMGLREGKNREIKNVLGA
LGLDVNRLIRISYGPFQLGELPIGQVQEIRGRTLREQLGPRLIADSKANFDAPIYNDQPA
AAEPEAEPADHGKAEWGSKREKAEDKRERALARLDTRRDDGRPSERGRSRGKPEERPARP
PVRRNRSSNVWMAPGARPTVEKKPKAAEEDLSPKAARRAPAEGKRRDRPKDAAAKAGGFD
AERQGKAGKSAGRKDAAGAGGFERRRPLESAERKSRDHGDRPPRRPNGERVARPADDRTS
SEGRKESARPPRGEGKKSFAGDRPRASAGGKPVAAKPASGKPAAHRSSGPRVGKPAGSRP
AEGKPGGRPGGGKPGNRPGGGKPPGKGPQGRGK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagacaagcccacgaggcccggcggcaaggccaagggtcgcgacaagaaa
cctcattccggcagcgagaagcctgcggcacgggcagccggcagtggtccggcggcgccc
accggtgcggacgagccgcagcgcatttcgaagatactgtcacgcgcaggcgtcgcgtcg
cgtcgcgacgtcgagcggatgatcatggaagggcgggtgagcctcaatggcgtcgtgctc
gacacgccggtcgtcaatgcgacgctcgccgacaggatcgaggtcgacggccatccgatc
cgcggcatcgaacggacgcgtctctggctctatcacaagccgggcggcctcgtgacgacc
aatgccgatccggaaggccgtccgacggtcttcgagaacctgcccgaagaactgccgcgc
gttctgtcggtcggtcgcctcgacatcaataccgagggcctgctgctcttgacgaatgac
ggcgggcttgcgcgcgtgctcgagctgccgtcgaccggctggctgcgccgctaccgcgtg
cgggcgcacggggaaatcgatcaggaggcgctcgaccgtctgaaggagggcatcgcggta
gacggcgtcctttacggagcgatcgaggcgacgctggatcgggtgcaaggttcgaacgtc
tggatcaccatgggcctgcgggaaggcaagaaccgtgagatcaagaatgtcctcggcgcg
ctcggcctcgacgtcaaccggctgatccgcatctcctacggtccgttccagctcggcgag
ctgccgatcggccaggttcaggaaatacgcggccgcacgctgcgcgaacagctagggcca
cggctgatagccgactccaaggcgaatttcgacgcgccgatctataacgaccagccggct
gctgccgagcccgaagcggagcccgccgatcacggcaaggcggaatggggcagcaagcgc
gagaaggccgaggacaagcgcgagcgtgctcttgcccgcctcgatacccgccgcgacgat
ggtcgcccgagcgaacgcggccgcagccgcgggaagccggaggagcgtccggcgcgcccg
ccagtccggcgtaaccgctcttccaacgtctggatggcgccgggtgcgcgtccgaccgtc
gagaaaaagccgaaggcagcggaggaagacctgtcgccgaaggcggcgcggcgcgcgcct
gcggaaggtaaacgccgcgaccgcccgaaggacgctgcggcgaaagcgggcggcttcgat
gcggaacgccagggcaaggcgggtaaatccgccggtcgcaaggacgccgcgggcgccggc
ggcttcgagaggcgtcgcccgctcgaaagcgcggagcggaaatcccgcgaccatggcgac
cgtccgccgcgccggcccaatggcgagcgagtggcccgcccggccgacgaccgcacctcg
tccgaaggacgcaaggagagcgctcggccgccgcgtggcgaaggcaagaagagctttgcc
ggcgaccggccacgcgcgagcgccggcggaaaaccggtggctgcaaagccggcttcggga
aagccggccgcccatcgttcgtccggcccgcgtgtcggaaagcccgccggcagcagaccc
gctgaaggcaagcccggcggtcgtccgggtggcggcaagcccggcaatcgtccgggcggc
ggtaagccgccgggcaaggggccgcagggcagggggaagtag
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