Sinorhizobium kummerowiae: PZL22_004490
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Entry
PZL22_004490 CDS
T09063
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
skm
Sinorhizobium kummerowiae
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skm03009
]
PZL22_004490
Enzymes [BR:
skm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
PZL22_004490
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
PZL22_004490
Ribosome biogenesis [BR:
skm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PZL22_004490
23S rRNA modification factors
PZL22_004490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
S4_2
SYY_C-terminal
Methyltransf_23
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WHS93376
LinkDB
All DBs
Position
complement(3238934..3239689)
Genome browser
AA seq
251 aa
AA seq
DB search
MSQDTQMTIRLDQLLLNRGLVASRARARDAIQRGTVKVDGRTVTKPASTFAQGVTLTIDD
PAQDYVSRAALKLVAALDHFGLDPSEQTCLDVGASTGGFTEVLLKRGAAHVVAVDVGHGQ
IHPRVAEDPRVTNIEGLNARSMTRGDINERAITFIVSDVSFISLKLALPPALGLAEPGAC
CILLVKPQFEAGRDAISKAGLLKDPESAPAVAAELERWLVEDMGWRSLGLIPSPIAGGDG
NSEFLLAGRKP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagatacacagatgacgatccgcctcgatcaattgctcctgaacaggggcctg
gtggccagccgcgcccgcgcccgtgacgcgatccagcggggaaccgtgaaggtcgacggc
cgcaccgtgaccaagccggcttcgaccttcgcgcaaggcgtgacgctcaccattgacgat
ccggcgcaggattatgtttcgcgtgcggcactgaaactcgtcgcggcgctcgatcatttc
ggcctcgatccatcggagcagacctgtctcgacgtcggggcttcgaccggcggctttacc
gaggtgctgctgaagcgcggcgccgcgcatgtggtcgccgtcgatgtcggccacggtcag
atccatccgcgcgtcgccgaagacccgcgcgtgacgaatatcgagggcttgaacgcccgg
tccatgacgcgcggcgacatcaatgagcgcgccatcactttcatcgtctcggacgtctcc
ttcatctcgctgaagctggcgctgccgccggccctcggcctggcggaaccgggcgcctgt
tgcatcctgctcgtcaagccgcagttcgaggccggccgcgatgcgatcagcaaggccggg
ctgctgaaggatccggagagcgctccggcggtggcagccgaactcgagcggtggcttgtc
gaggacatgggctggcgaagcctcggcctgatcccctcgcccattgccggcggtgacggc
aacagcgaatttcttctggcggggcgcaagccatga
DBGET
integrated database retrieval system
