Sinorhizobium kummerowiae: PZL22_004540
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Entry
PZL22_004540 CDS
T09063
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZL22_004540 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_004540 (mutY)
Enzymes [BR:
skm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PZL22_004540 (mutY)
DNA repair and recombination proteins [BR:
skm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZL22_004540 (mutY)
Prokaryotic type
PZL22_004540 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_8
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WHS93421
LinkDB
All DBs
Position
complement(3288397..3289497)
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AA seq
366 aa
AA seq
DB search
MMRDLPQAASAALLLEWYDRHHRDLPWRVPPAAARKGAVADPYRVWLSEVMLQQTTVQAV
KAYFEKFLALWPTVGDLAAADTEDVMKAWAGLGYYARARNLKKCAEAVARDHGGRFPDSE
EGLKALPGIGDYTAAAIAAIAFNRASAVLDGNVERVISRLHAVETPLPAAKPEMRALVQA
LTPADRPGDFAQAMMDLGATICTPKRPACSLCPIPTDCRALKTADPETFPRKAAKKEKPL
RLGAAFVAVDGLEAVYLRKRPETGLLGGMTEVPGTDWTSRRDGDTSIDAHPFPAEWEPCG
TVNHVFTHFELHLSVFRARVGRADVGEARTGTSGWWEPLASLRAQALPTVMKKAIAKAIP
HAFEAG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgatcttccacaggcggcgagcgccgcacttcttctcgaatggtacgatcgt
caccaccgcgaccttccatggcgggtgccgccggcagcggcgcggaaaggtgcggttgcc
gacccctatcgcgtctggctgtcggaggtgatgcttcagcagacgacggtccaggcggtc
aaggcttacttcgagaaattcctcgccttgtggccgacggtcggcgaccttgccgcggca
gacaccgaggatgtgatgaaggcctgggccggcctcggctactacgcccgcgcgcggaac
ctgaagaaatgtgccgaagcggtcgcccgcgatcatggcggccgttttcccgatagcgaa
gaggggctgaaagcgctgcctggcatcggcgactacaccgccgcagccatcgccgcgatc
gccttcaaccgggcaagtgccgttctcgacggcaatgtggagcgcgtgatctcgcgcctc
catgccgtcgaaacgccgctgcccgcggccaagcccgaaatgcgagccctcgtccaggcg
ctgaccccggccgaccggccgggcgatttcgcccaggcgatgatggatctcggtgcgacg
atctgcacgccgaaacggcctgcctgttcgctctgtcccattcctacggattgccgggcc
ctgaaaacagccgacccggagacatttccgcgcaaggcagcaaagaaggagaagccgttg
cgcctgggtgcggccttcgtcgccgtcgacggcctcgaggcggtctatcttcgcaagcgc
cccgaaacgggcctcctcggcggcatgacagaggtgcccggcacggactggacgtcgcgc
cgcgacggcgacacgtcgatagacgctcatcccttccccgcagagtgggagccatgcggg
accgtcaaccacgtcttcacgcatttcgagctgcacctatccgtctttcgggccagggtc
gggcgcgccgatgtcggagaggcgcgaacgggcacgagcgggtggtgggagccgctcgcc
tcgctcagggcgcaggcgcttccgactgtcatgaaaaaggcaatcgccaaggctataccg
catgcgttcgaagcgggataa
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