Sinorhizobium kummerowiae: PZL22_004628
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Entry
PZL22_004628 CDS
T09063
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm00550
Peptidoglycan biosynthesis
skm01100
Metabolic pathways
skm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PZL22_004628
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PZL22_004628
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
skm01003
]
PZL22_004628
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skm01011
]
PZL22_004628
Enzymes [BR:
skm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PZL22_004628
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PZL22_004628
Glycosyltransferases [BR:
skm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PZL22_004628
Peptidoglycan biosynthesis and degradation proteins [BR:
skm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PZL22_004628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WHS93506
LinkDB
All DBs
Position
complement(3374854..3377088)
Genome browser
AA seq
744 aa
AA seq
DB search
MRQNLRDMKAVQEPRKEDNRPKRRHIFLRIDSWIDSTVWSAGFRLGEWWEDTTIFFRRFR
VRGWKRAFFEVLGEGMTLGAAGSVLMLALALPAFEETKGNWRAQSDFAVTFLDRYGNEIG
HRGIIHEDSVPIDELPDHLIKAVLATEDRRFFDHWGIDFLGLARAMTENARAGGVVQGGS
TLTQQLAKNLFLSNERTIERKIKEAFLAVWLESNLSKKEILRLYLDRAYMGGGTFGAAAA
AQFYFGKAITDVNLAESAMLAGLFKAPARYAPHVNLPAARARANEVLSNLVQGGLMTEGQ
VIAARLTPASVVDRAQVKAPDFFLDWAFEEVQRIAAPFAQHSLIVRTTIDMGLQQAAEEA
VESGLRQYGESYKVKQGALVMVEHGGAVRAMVGGRDYGESQFNRATRALRQPGSSFKVYT
YAAAMEKGMTPETVVVDAPITWRGWSPQNYGRKYAGRVTVMNALARSINTIPVRLAKDKL
GTEIIAETAKRMGIETPVRTDKTMPLGTSEVTVLDQATAYAVFPAGGLQSRRHGISQILN
YDGDILYDFGRDAPPQRRVLSEQAVSSMNRILTQIPVIGTARRAALDNGIITGGKTGTTQ
AYRDAWFVGFTGDYTTAVWFGNDDYTSTDEMTGGSLPAMTFKRLMDYAEQGIEHRAIPGI
EIAPAKPAKERSAETAKPDENALPPLVRPRSLSADVTRLLKKIGDTFEKAQPLKARERPG
GKVAVLEPTDRGVNMRTMPGTTNN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagaaccttcgggacatgaaagccgtgcaggaaccgaggaaagaggacaaccgg
ccgaaaaggcgacacatctttcttcggatcgattcctggatcgattcgaccgtatggagc
gcaggattccggctcggggagtggtgggaggacaccaccatctttttccgccggtttcgc
gtgcgcggctggaaaagagcgttcttcgaagtgctcggcgagggaatgacgcttggcgcg
gcgggctcggtgctgatgttggcgctcgcccttcccgccttcgaggaaaccaagggcaac
tggcgggcgcaaagcgatttcgcagtcacctttcttgaccgctacggtaacgagatcggc
caccggggcatcatccacgaggattccgtcccgatcgacgagctgccggatcacctcata
aaagcggtcctcgccacggaagacaggcgcttcttcgaccattggggcatagattttctc
gggctcgcacgcgccatgaccgagaacgctcgcgccggcggggtcgttcaaggcggctcg
acactcacgcagcagctggccaagaacctgttcctctcgaacgagcggacgatcgagcgc
aagatcaaggaagcctttctcgccgtctggctcgaatccaacctgtcgaagaaggaaatc
ctccgcctctatctcgaccgcgcctatatgggcggcggcaccttcggcgcggcagcggcg
gcgcaattctatttcggcaaggcgattaccgacgtcaatcttgccgagtcggcgatgctc
gccgggctcttcaaggcgccggcgcgctatgccccccatgtgaacctgccggcggcccgt
gcccgcgccaacgaggtcctgagcaatctcgtccagggcgggctgatgacggagggacag
gtgatcgccgcccgcctcaccccggcctccgtggtcgatcgtgcccaggtcaaggcaccg
gatttcttcctcgactgggccttcgaagaggtccagcgcattgccgctcccttcgcgcag
cattcgctgatcgtgcgcacgacgatcgacatggggctgcagcaagcagccgaggaagcg
gtcgaatcgggcctcaggcaatatggcgagagctacaaggtcaagcagggcgctctcgtc
atggtcgagcatggcggcgcggtacgggcgatggtcggcggccgcgactacggcgaaagc
cagttcaaccgcgccacgcgcgcgctgcgccagccgggctcgtccttcaaggtctatacc
tacgctgccgcgatggaaaagggcatgacaccggaaaccgtcgtcgtcgacgcgccgatc
acctggcgtggctggtcgccgcagaactacggccgcaaatatgccggccgggtgacggtg
atgaacgcgctcgccagatcgataaacactattccggtccgcctcgccaaggacaagctc
ggtacagaaatcattgccgagaccgccaagagaatgggcatcgagaccccggttcgcacc
gacaagaccatgccgctcggcacctccgaagtgaccgtgctcgatcaggcgacggcctac
gcggtctttccggcgggcgggttacagtcgcgacgccacggcatcagtcagattctcaac
tacgacggcgacattctctacgacttcgggcgcgacgcgccgccccaacgcagggtgctg
agcgaacaggcagtctcgtcgatgaaccgcatcctgacgcagatcccggtcatcggcacg
gcgcgacgcgcagccctcgacaacgggatcatcaccggcggcaagaccggaacgacacag
gcctatcgcgacgcatggttcgtcggcttcaccggcgactacaccacggccgtctggttc
ggcaatgacgactatacctccaccgacgaaatgaccggcggctctctcccggcgatgacc
ttcaaacgactgatggactatgccgaacaggggatcgagcaccgcgcgattccgggcatc
gaaatcgcgcccgccaaaccggcgaaggagcgatccgccgaaactgcgaagccggacgag
aatgccctgccgccgctcgtgcggccgcgatcactgtccgcggacgtaacccggctgttg
aaaaagatcggcgacacattcgagaaagcgcaaccgctcaaggcgcgcgaaaggcccggc
ggcaaggtggccgtgctcgagccgacggatcgaggcgtgaacatgcggaccatgccgggc
acgacaaacaattga
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