Sinorhizobium kummerowiae: PZL22_005363
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Entry
PZL22_005363 CDS
T09063
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PZL22_005363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_005363
DNA repair and recombination proteins [BR:
skm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PZL22_005363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WHS96478
LinkDB
All DBs
Position
pSkuCCBAU71714a:502803..503609
Genome browser
AA seq
268 aa
AA seq
DB search
MALRPYWKGYLKLSLVTCPVQMMPATSESEKVRFHTLNRQTQNRVVSHYVDSVTGKEVKE
EDEVKGYQRGEHEYVILEDEELENVALESTKTIDISTFTPRDSIEWIWLDTPYCLSPNDP
VGQEAFSVIRDAMEAQNMVGISRLVISRRERAVMLEPRGKGIVLWTLRYGDEVRDEDSYF
EAIGDEQADSEMMPLVQQLIKKQTKDWTPKMVADPVQERLLEIIAAKKKALKPQKAQGKT
APSSSPSNVVSIMDALRKSVAAEKRATK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgtccctattggaaaggctatctcaaactctcactcgtcacctgtccggtg
cagatgatgccggcgacctccgaaagcgagaaggtccgctttcataccctcaatcgccag
acccaaaaccgcgtcgtcagccactacgtcgactccgtgaccggcaaggaggtcaaggaa
gaggatgaggtgaagggctatcagcgaggggagcacgaatacgttattctcgaagacgag
gagcttgagaacgttgctctcgaaagcaccaagacgatcgacatctccacattcacgccg
cgcgatagcatagagtggatctggctcgatacaccctattgtctctcgcccaacgatcct
gtcggacaggaggcattttccgtgatccgcgacgcgatggaggcgcagaacatggtcggc
atatcccggctagtgatctcacgccgcgagcgtgccgtcatgctcgagccacgtggtaag
ggtatcgttctgtggacgctgcgctacggagacgaagttcgcgatgaagacagctatttc
gaggcgatcggcgatgaacaggccgattccgagatgatgccgctcgtccagcagttgatc
aaaaagcagaccaaggactggaccccgaaaatggtcgccgacccggtccaggaacggctg
ctcgaaatcatcgcagccaagaagaaggcgttgaagccgcagaaggcccagggcaagaca
gcaccttcgtcgtcgccgagcaatgttgtcagcatcatggatgccttgcggaaatcagtc
gcggctgagaaacgggcgaccaaatga
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