Sinorhizobium kummerowiae: PZL22_005784
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Entry
PZL22_005784 CDS
T09063
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
skm
Sinorhizobium kummerowiae
Pathway
skm03030
DNA replication
skm03430
Mismatch repair
skm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PZL22_005784
03430 Mismatch repair
PZL22_005784
03440 Homologous recombination
PZL22_005784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skm03032
]
PZL22_005784
03400 DNA repair and recombination proteins [BR:
skm03400
]
PZL22_005784
Enzymes [BR:
skm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PZL22_005784
DNA replication proteins [BR:
skm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PZL22_005784
DNA repair and recombination proteins [BR:
skm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PZL22_005784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WHS95664
UniProt:
A0ABY8TEE0
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All DBs
Position
pSkuCCBAU71714a:909654..910631
Genome browser
AA seq
325 aa
AA seq
DB search
MTSQLDMFARDVRPAAARAEASRARRQTSTSFSETEMLAALKATGRYRILRKLEARTVAS
EVRPGFPLRGVILDTETTGLDARKCEIIEIGLVSFTYNEEGEIGDVVAVYGGLQQPTIAI
PPDITRLTGITDAMVAGQSIDIAAVQAIVGPADLIIAHNAGFDRPFCEAFSDVFVRKAWA
CSVSEIDWSGRGFEGTKLGYLIGQSGYFHDGHRAVDDCFALLGVLEQSSGGAALPPFAEL
YKASQRSRVRIFAENAPFDLKDVLKARGYRWSDGSDGRPKSWWIEVAEEELEAELGFLRK
EIYRWDEADPPTQRLTAFDRYRARR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcagctcgacatgtttgcccgagatgtgcgaccagcagccgcgagagccgag
gcaagccgtgcccggcggcagacgtcgacatccttctccgaaaccgagatgcttgccgcg
ttgaaggcgacgggtcgctacaggatcttgcgaaagcttgaagctcgcacggtcgcatcc
gaggtgaggcccggttttcccctgaggggcgtcatcctcgacactgagacgaccgggctc
gatgcccgtaaatgcgagatcatcgagatcgggcttgtctcgttcacctacaacgaggag
ggcgagatcggcgatgtggtagctgtttatggcggtttgcagcagccgacaattgccatt
ccacccgacatcacccggttgacgggtatcaccgatgccatggtcgccggccagtcaatc
gatattgctgcagtccaagcaatcgttgggcctgcggatctcatcatcgcccacaatgcc
ggcttcgatcggccgttttgcgaagcgttttcggatgtgtttgtccgcaaggcctgggcg
tgctccgtctccgaaatcgattggagtggccgcggctttgaaggcacgaagctcggctat
ctgatcggtcagagcggatatttccacgacgggcatcgggctgtagatgactgctttgct
ctcctcggggtcctggaacagtccagtggtggcgccgcactgccgccgttcgccgaactt
tacaaagcgagccagcgttcacgggtgaggattttcgcggagaatgcgccgttcgacctg
aaggacgtgctgaaggctcgcgggtaccgctggtccgatggcagcgacggccgcccaaaa
tcctggtggatagaggtcgccgaggaggagctcgaggctgaactcggcttccttcggaag
gagatctatcgctgggacgaggcagatcctccgacgcagcggctgacggctttcgacaga
tacagagcgcgaagatag
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