Spiroplasma kunkelii: SKUN_0010
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Entry
SKUN_0010 CDS
T04056
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
skn
Spiroplasma kunkelii
Pathway
skn03030
DNA replication
skn03430
Mismatch repair
skn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SKUN_0010 (holB)
03430 Mismatch repair
SKUN_0010 (holB)
03440 Homologous recombination
SKUN_0010 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
skn03032
]
SKUN_0010 (holB)
03400 DNA repair and recombination proteins [BR:
skn03400
]
SKUN_0010 (holB)
Enzymes [BR:
skn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SKUN_0010 (holB)
DNA replication proteins [BR:
skn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SKUN_0010 (holB)
DNA repair and recombination proteins [BR:
skn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SKUN_0010 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
RRM_PARP14_2
KaiA
Motif
Other DBs
NCBI-ProteinID:
ALA96935
UniProt:
A0A0K2JEC0
LinkDB
All DBs
Position
12564..13400
Genome browser
AA seq
278 aa
AA seq
DB search
MDNLFTKNDVEKMTLFKNLILKNNLLNQLLISCNNKVKLEKFTTEVIKFLLCFKKQEVDC
ECDICHRINNKTYYDLKIKGDFETTIKKEEIQEIIQTFNYSALEQTGIKVYVINGIDLLT
LEAANSLLKFLEEPSKNTYAFLLTTNKTNVIDTIKSRCLNIILENTTDLLEVDDFKNEFI
STFFNNFASNSINNFIHMRQLNNYDSVECRQFFLAIANVLKKKEWEKYQITNQDLIQKLN
HKNSKLIEICYTIANLLLENLNKELILEKGFIDWYNEV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggataatttatttacaaaaaatgatgttgagaaaatgacactatttaaaaatttaatt
ttaaaaaataatttattaaatcaacttttgatttcttgcaataataaagttaaattagaa
aaatttacaacagaagttattaaatttttattgtgttttaaaaaacaagaagtagattgt
gaatgtgatatttgtcaccgcattaataataaaacttattatgatttaaaaattaaaggt
gattttgaaacaacaatcaaaaaagaagaaattcaagaaattattcaaacatttaattat
tctgcgttagaacaaacaggaataaaagtatatgttattaatggtattgatttattaaca
ttagaagcggctaattcattattaaaatttttagaagagcctagtaaaaatacatacgct
tttttgttaacaactaataaaacaaatgttattgatactattaaatcacgttgtttaaat
attattttagaaaatacaactgatttattagaagttgatgattttaaaaatgaatttatt
tctaccttttttaacaattttgcaagtaactcgataaataactttattcatatgcgtcag
ttaaataattatgatagtgttgaatgccgccaattttttttagcaattgctaatgtttta
aaaaagaaagaatgagaaaaatatcaaattacaaatcaagatttaattcaaaaactaaat
cataaaaatagcaagttaattgaaatttgttatactattgccaatttattattggaaaat
ttaaataaagaattaattttagaaaagggatttattgattgatataacgaggtgtaa
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