Spiroplasma kunkelii: SKUN_001035
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Entry
SKUN_001035 CDS
T04056
Symbol
ffh
Name
(GenBank) signal recognition particle
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
skn
Spiroplasma kunkelii
Pathway
skn02024
Quorum sensing
skn03060
Protein export
skn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SKUN_001035 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SKUN_001035 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SKUN_001035 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
skn02044
]
SKUN_001035 (ffh)
Enzymes [BR:
skn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SKUN_001035 (ffh)
Secretion system [BR:
skn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SKUN_001035 (ffh)
Eukaryotic Sec-SRP protein
SKUN_001035 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
MMR_HSR1
AAA_17
CbiA
ResIII
AAA_19
6PF2K
APS_kinase
NB-ARC
AAA_33
Roc
SRPRB
Lip_prot_lig_C
AAA_30
Arf
AAA_16
AAA_31
Motif
Other DBs
NCBI-ProteinID:
ALA97921
UniProt:
A0A0K2JI65
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All DBs
Position
complement(874308..875666)
Genome browser
AA seq
452 aa
AA seq
DB search
MIGDFLANRLKKSIEKNMKKSTLTTDAIAEIMREIWLALLEADVNNEVVKDFIKAVETKA
RGEYILDGLNASQMMVKIVHEELVNIFGKTVKELSFTSKPTIVMMVGLQGSGKTTTTGKI
AKLVEKKYYKKPLLVACDIYRPAAIKQLKTIGKNLNIEVFERGTQNPVTTSQQAIIYAKD
NKNDVILIDTAGRLHIDSELMHELKEIKNNITPDEILLVVDGMTGQDIINVATEFNQLLK
LTGVVVTKLDGDARGGAALSITHLTKLPITFIGTGEGMSNLQIFYPDRMADRILGMGDVQ
TLVEKAKDVLDERDIKKTMNRMMMGQFDLQDLLNQMRQISKMGKIGGIMKLLPGMPKLSD
EKIDDAERKLKVTEVLLSSMTVKERREPRLLKHLSRKNRILKGSGRTEKEYNELINQFEK
TKKQVDEIARQIKSGRMPNIPGMGGLSGMGFN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattggagattttttagcgaatcgattgaaaaaatcaattgaaaaaaatatgaaaaaa
tcaaccttaacgactgatgctattgctgaaataatgcgtgaaatttgattagcattattg
gaggctgatgttaataatgaagtagttaaagattttattaaagctgttgaaacaaaagca
cgaggtgaatatattcttgatggattaaatgcatcacaaatgatggttaaaattgtgcat
gaagaattagttaatatatttggaaaaacagttaaagaattatcatttacttcaaaacca
acaattgtaatgatggttggtttacaaggaagtggtaaaacaaccacaacggggaaaatt
gctaagttagttgaaaagaaatattacaaaaaaccattattagttgcttgtgatatttat
cgaccagcagcgattaaacaattaaaaacaattggaaaaaatttaaatattgaagttttt
gagcgcggaacacaaaatccagtaacgacttcgcaacaagcaattatttatgcaaaagat
aataaaaatgatgttattttaattgatacagctggacgtttacatattgattctgagtta
atgcacgaattaaaagaaattaaaaataatattaccccggatgaaattcttcttgttgtt
gatgggatgacagggcaagacattattaatgttgctactgaatttaatcagttattaaaa
ttaacaggagtagttgttacaaaactagatggtgatgctcgtggtggggctgctttgtca
attacacatttaacaaaattaccaattacttttattggaactggagaaggaatgagtaat
ttacaaatcttttatcctgaccgaatggctgatcgaattttaggaatgggagatgttcaa
accttagttgaaaaagcaaaagatgtattagatgaacgtgatatcaaaaaaacaatgaat
cgaatgatgatgggacagtttgatttgcaagatttattaaaccaaatgcgccaaatttca
aaaatgggtaaaataggcggaattatgaaattattacctggaatgccaaaattaagtgat
gaaaaaattgatgatgctgaacgaaaattaaaagtaaccgaagtattattatcatcaatg
acagtgaaagaacgtcgtgaaccacgattattaaaacatttatcacgaaaaaatcggatt
ttaaaaggctcaggacgaactgaaaaagaatataatgagctaattaatcaatttgaaaaa
acaaaaaaacaagttgatgaaattgctcgtcaaattaaatcagggcgtatgccaaatatt
cctgggatgggtggtctaagcggaatgggttttaattaa
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