Spiroplasma kunkelii: SKUN_001036
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Entry
SKUN_001036 CDS
T04056
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
skn
Spiroplasma kunkelii
Pathway
skn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SKUN_001036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skn03019
]
SKUN_001036
Messenger RNA biogenesis [BR:
skn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SKUN_001036
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_2
dUTPase
KH_KhpA-B
DUF7528
Motif
Other DBs
NCBI-ProteinID:
ALA97922
UniProt:
A0A0K2JHM3
LinkDB
All DBs
Position
complement(875750..877279)
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AA seq
509 aa
AA seq
DB search
MQTHIWVIILIAVAICCYFLGYLFEKYLRFKLIKKTKLKIKQAKDKAKKIINAAKADGRV
EAAQIRQEMKDELTRKREEFLATEKFLVDRERLIVEREEVLNGKEQEVFRKKEELQGKIN
YYQEMVERNLHQLEKVAGYSLEEAKDVLFKEISDRYQKEIGEFLRNAENTAKINAKQTAI
NIITTAIERYAVKVVAEKTTTSIYLEDDNMKGRIIGKDGRNIRTFEIAAGVDLIIDDTPN
VVQISSFNPIRREIAKKTLEKLLLDGRIQPTRIEETIKLEQEEIEMTILEAGKEIAAELA
IDNLDIELIRHLGILKYRTSYGQNVLLHSVEVAKLAAIMASELGLDPAIAMRAGLLHDIG
KAVDFENEGSHVTLGVQIATKCNEHPIIINAIASHHGEVPVTNPYSVLVSAADTLSAARP
GSRNNNVENYIARMNELEKICQKVHGVQSAYVLQAGRQIRIIVNPIINDDARTHKIALNI
KEKIKQAKAIPGDIVITVIRELRVTETVI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacacatatgagtaattatccttattgctgttgcaatatgttgttactttctt
ggatatttatttgaaaaatatttaagatttaaattaatcaaaaaaacaaaattaaaaatt
aaacaagcaaaagataaagcaaaaaaaattattaatgctgctaaagcagatggacgtgtt
gaagcagcacaaattagacaagaaatgaaagatgaattaactcgcaaacgtgaagaattt
ttagcaaccgaaaaatttttagtagatagagaacgtttaattgttgagagagaagaagta
ttaaatggcaaagagcaagaagtgtttcgtaagaaagaagaattgcaaggaaagattaac
tattatcaagaaatggtagaacgaaatcttcatcaacttgaaaaagttgccggatattca
cttgaagaagcaaaagatgttctttttaaagaaataagtgatcggtatcaaaaggaaatt
ggtgaatttttacgaaatgctgaaaatactgcaaaaattaatgccaaacaaacagccatt
aacattattactactgcaattgaacgttatgcagtaaaagttgtggcagaaaaaacaaca
acttcaatttatttagaagatgataatatgaaaggacgaattattgggaaagatggacgt
aatattcgcacatttgaaatagcagcaggggttgatttaattattgatgatacacctaat
gttgtacaaatttcatcttttaacccaattcgtcgggaaattgcaaaaaaaactttagaa
aaattattacttgatggtcgaattcaaccaacgcgaattgaagaaacaataaaattagaa
caagaagaaatcgaaatgacaattcttgaagcaggaaaagaaattgcggctgaattagca
attgataatttagatattgaattaattcgtcacttaggaattttaaaatatcgaactagt
tatggtcaaaatgtcttattacattctgtcgaagtagcaaaattagcagcaataatggca
agtgaactggggttagaccctgcaattgcaatgcgtgctgggttattacatgatattgga
aaagcagttgattttgaaaatgaaggaagtcatgttactttaggtgttcaaattgcaaca
aaatgtaatgaacatccaattattattaatgcaattgcttcgcatcatggcgaagtacca
gtaactaatccttattctgttttagtatcagcagctgatacgttgtcagctgctcgtcca
ggcagtcgtaataataatgttgaaaattatattgctcgaatgaatgagttagaaaaaatt
tgccaaaaagtccatggtgtccaatcagcttatgttttacaagcaggacgacaaattcga
attattgttaatccaattattaatgatgatgctcgtactcataaaattgcgcttaatatt
aaggaaaaaattaaacaagcaaaggcaattcctggtgatattgttattacagttatccgt
gaattacgggttactgaaactgttatttaa
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