Spiroplasma kunkelii: SKUN_001200
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Entry
SKUN_001200 CDS
T04056
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
skn
Spiroplasma kunkelii
Pathway
skn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SKUN_001200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skn03019
]
SKUN_001200
03009 Ribosome biogenesis [BR:
skn03009
]
SKUN_001200
Enzymes [BR:
skn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SKUN_001200
Messenger RNA biogenesis [BR:
skn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SKUN_001200
Ribosome biogenesis [BR:
skn03009
]
Prokaryotic type
rRNA helicases
SKUN_001200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Cas3-like_C_2
P-loop_SecA
XanC_C
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALA98075
UniProt:
A0A0K2JHK2
LinkDB
All DBs
Position
complement(1010101..1011435)
Genome browser
AA seq
444 aa
AA seq
DB search
MNFNTLNLYPALQRMIVKMGYTNLTEIQEKAIPVALNNQDIIGKSHTGTGKTVAFILPIL
QNLNTHLKQPQAIILCPTHELASQIIDQVRKLATYLEGVNATLICGGSHIQRQIYALRKS
NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKNDLDKVFQNAPKQYQTLLF
SATMSKQVLEIANNYQNNPVEIVVTKNVIEQNNIKQQYVNALSYHKEDVLIALYKHLQPK
RSIIFSNTKVFTNKIAEMLTNNAIPCCVINGDKSRYERGQAMRLFRDGKVQVMVATDVAA
RGIDIDNIDYVINYDIPIERESYIHRIGRTARAGATGVAISIVSKRNDLREIQHLGTYQK
KKIELLDITTYDLKQKPQGIKNISSSNKKANFNQKNNSFKYEYSYLDNKKNQYNAKKKFN
TQGNKKLKQKKQKFDKSNFSFNQI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaatacattaaatttatacccagcattacagcgaatgattgttaaaatgggt
tatactaacctaactgaaatccaagaaaaagctattccagttgctcttaataatcaagat
attattggtaaaagtcatacgggaactggtaaaactgtagcttttattttgccaatttta
caaaacttaaatacgcacttaaaacaaccacaagcgattattttatgcccaacccatgaa
ttagcgagccaaataattgaccaggttcgaaaattagcaacttatttggaaggtgtaaat
gcaaccttaatttgtggtggttcacatatccaacgtcaaatttatgctttacgaaaaagt
aatattattgtgggaactccgggacgaattgctgatcatattaatcgtaaaacattacga
ttagataaaattaaaacaattgttttagatgaagctgatgaaatgttaaaaatgggattt
aaaaatgatcttgataaagtatttcaaaatgctcctaaacaatatcaaacattattattt
tcagcaacaatgtcaaaacaagtattagaaattgctaataactatcaaaataatcctgtt
gaaattgttgttacaaaaaatgttattgaacaaaataatattaaacagcaatatgtaaat
gcattgtcttatcataaggaagatgttttaatagcattatataaacatttgcaaccaaaa
cgaagtattattttttcaaatacaaaagtttttactaataaaattgctgaaatgttaaca
aataatgctattccttgttgtgtcattaatggtgataaaagtcgttatgaacgagggcag
gcaatgcgtttatttcgggatggtaaagtacaagttatggttgccactgatgttgcggca
cgaggaattgatattgataatattgattatgttattaattacgatattccaatagaacga
gaaagttatattcatcgtattggaagaacagcacgtgctggtgctactggtgtagcaata
tcaattgtttcaaaacgtaatgatttaagagaaattcaacatttgggtacatatcaaaag
aaaaaaattgagttattagatattacaacatatgatttaaaacaaaaaccacaaggaata
aaaaacattagttctagtaataaaaaagcaaattttaatcaaaaaaataatagttttaaa
tatgagtattcatatttagataataaaaagaaccaatataatgcaaaaaagaaatttaat
acccaaggtaataaaaaattaaaacaaaaaaagcaaaaatttgataaatctaattttagt
tttaatcaaatttaa
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