Spiroplasma kunkelii: SKUN_00128
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Entry
SKUN_00128 CDS
T04056
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
skn
Spiroplasma kunkelii
Pathway
skn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SKUN_00128 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skn03400
]
SKUN_00128 (uvrB)
DNA repair and recombination proteins [BR:
skn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SKUN_00128 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SKUN_00128 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
P-loop_SecA
AAA_30
AAA_22
Kinesin
AAA_19
HerA_C
TrwB_AAD_bind
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALA97052
UniProt:
A0A0K2JF52
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All DBs
Position
116826..118790
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AA seq
654 aa
AA seq
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MFKLTSNYLPAGDQPLAIEKLTTNLLANKKHQVLLGATGTGKTFTMANVIENYQKPTLVM
AHNKTLAMQLYVELKEMFPENRVEYFVSNFDFYQPEAYLPGKDLYINKDARQNMELDMMR
LSAFNALITSKDVIVVASVAAIYAAQDPNEYKKSFLQINRNQKISKKDLANFLVSSGYVR
NDIELIPGSFSAKGDVIKIIPGWNVKTFIRIDLFGDEIDDLAYIDGITGDVTQWLSTLTI
FPAQDYITSPERLAEAIKRIEAELKVRLAELEAAGKIVELQRLKQRTEYDLDLLRESGIC
SGIENYSRHLDLREEGEAPYTLIDFFGQDFLTIIDESHMSFPQIRAMYNTDRSRKETLVN
YGFRLKSALDNRPLNFDEFNQKLKNVIFVSATPGDYELSLVNNEVVEQIIRPTGLLDPTV
EVKSTVGQIDDIIEQVKIRRKKNERVFITTLTIRMSEDLTSYLQEQNVKVAYLHSELKTL
ERSQILLDLRKGVYDCIVGVNLIREGIDIPEVSLICILDADKQGFLRNERSLIQTIGRVA
RNAAGHVILYADSVSGSMQKAMRETARRRKIQEAYNLKYHITPATIIKNIRDYTNIKRQG
DKLHNIKNKKLKEYKTAKEGLLQDLRKEMYEASKKLDFERAAELRDIIIEIEAE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaaattaacatcaaattatttgccagcaggtgatcaacctctggcaattgaaaaa
ttaactaccaatttattagcaaataaaaaacatcaagttttattaggagcaacgggaact
ggaaaaacatttacaatggcaaatgttattgaaaattatcaaaaaccaacattggtgatg
gcacataataaaacattagcaatgcaattatatgttgagttaaaagaaatgtttccagaa
aatcgtgttgagtattttgtttcaaactttgatttttatcaaccggaagcttatttgcca
ggaaaagatttatacattaataaagatgctcgccaaaatatggagttagacatgatgcgg
ttaagtgcttttaatgctttaataactagtaaagatgttattgtcgtggcttctgttgct
gcaatttatgcagcacaagatccaaatgaatataaaaaatcttttttgcaaattaatcgt
aatcaaaaaattagtaaaaaagatttagccaattttttagtatcatcaggatatgttcgt
aatgatattgaattgattccaggtagttttagtgctaaaggtgatgtaattaaaattatt
ccagggtgaaatgttaaaacttttattcgcattgatttgtttggagatgaaattgatgat
ttagcttatattgatggaattactggtgatgttacacagtggttatcaacattaacaatt
tttccagcgcaagattatattacttctccagaacgcttagctgaagcaattaagcgaatt
gaagcagaattaaaagttcgcttagctgaattagaagcagctggaaaaattgttgaatta
caacgtttaaaacaacgaactgaatatgatttagatttacttcgtgaaagtggaatatgt
tctggaattgaaaactattcacgacatttagatttacgagaagaaggagaagcaccgtat
actttgattgatttttttggccaagattttttaactattattgatgaatcacatatgtca
tttccacaaattcgagcaatgtataacacagatcgaagtcgcaaagaaaccttagtaaat
tatggttttcgtttaaaaagtgcattagataatcgtcccttaaattttgatgaatttaat
caaaaattaaaaaatgttatttttgtttcagcaactccgggtgattatgaattaagttta
gtaaataatgaagtggttgaacaaattattcgtccaacgggattattagatccaaccgta
gaagtaaaatcaacagtaggacaaattgatgatattattgaacaagtaaaaattcgtagg
aaaaaaaatgaacgtgtttttattactactttaacaattcggatgtcagaagatttaaca
agttacttacaagaacaaaatgttaaagttgcatatttacatagtgaattaaaaacttta
gaacgtagtcaaatcttattggatttacgaaaaggagtttatgattgtattgttggtgtt
aacttaattcgtgaaggaattgatattccagaagtatcattaatttgtattcttgatgct
gataagcaaggatttttacgaaatgaacgaagtttaattcaaacaattggtcgtgttgca
aggaatgcggctgggcatgttattttatatgctgatagtgtttctggatcaatgcaaaaa
gcaatgcgagaaactgctcgccgtcggaaaattcaagaggcatataatttgaaatatcat
attactccagcaacaattattaagaatattcgtgattatactaatattaaacgtcaaggt
gataaattacataacattaaaaataaaaaattaaaagaatataaaacagctaaagaagga
ttactacaagatttacgaaaagaaatgtatgaggcaagtaaaaaacttgattttgaacga
gctgcagaattacgcgatattattattgaaattgaagcagaataa
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