Spiroplasma kunkelii: SKUN_00564
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Entry
SKUN_00564 CDS
T04056
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
skn
Spiroplasma kunkelii
Brite
KEGG Orthology (KO) [BR:
skn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
skn03019
]
SKUN_00564
03009 Ribosome biogenesis [BR:
skn03009
]
SKUN_00564
Enzymes [BR:
skn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SKUN_00564
Messenger RNA biogenesis [BR:
skn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SKUN_00564
Ribosome biogenesis [BR:
skn03009
]
Prokaryotic type
rRNA helicases
SKUN_00564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrD-helicase
AAA_19
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
ALA97459
UniProt:
A0A0K2JFU1
LinkDB
All DBs
Position
complement(479520..480896)
Genome browser
AA seq
458 aa
AA seq
DB search
MSNFNQFGFKRFLNLGLTELKFVEPTIVQEKVMPLLLKHKNIICKAHTGTGKTFAFCLPI
LNNINYEQTKIQSIIVTPTRELAKQIYDNIRFFKKFKPNLQVNYFIGGEYIKRQIEQLQR
IQPHIIIATPTRLKDLFEQQSINLGKLTTFIIDECDMLFDLGFIENVDYILSKVNPNVQV
SVFSATIPPELKPFLIKYLKNPHYLDLNANQITNQNITHILIPTKNQERETILLKLLKTF
DPYLCLIFVNKKTDINKYYDLLLKHNYSVIQLHAGLEPRLRTQVVKRIRNLEYKHAIASD
IAARGIDFIGVSHVISIDLPNDLEYYIHRSGRTGRANYTGYSYVLYDTKNLNLVQQLMTK
GITFKTKKWNQQGELVETVLSDDRPKKQSSFAVENEINKIINRYKTKDNNKKIKPGYKKK
RKAEIDEFKKQVRRSHIKESIKKKNEQINYLIKIKKKT
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattttaatcaatttggttttaagcggtttttaaatttaggccttactgaatta
aaatttgttgaaccaactattgtgcaagaaaaagtaatgccattattattaaaacataaa
aatattatatgtaaggcacatacaggaactggaaaaacatttgcgttttgtttaccaatt
ttaaataatataaattatgagcaaacaaaaattcaatctattattgtaaccccaacccgt
gaattagcaaaacaaatttatgataatattcgtttttttaaaaaatttaaaccaaattta
caagttaattattttattggtggcgaatatattaaacgtcaaattgaacaattgcaacga
attcaaccacacattattattgccactccaacacgactaaaagatttgtttgaacaacaa
agtataaatttaggtaaattaacaacttttattattgatgaatgtgatatgctttttgat
ttaggttttattgaaaatgttgattatattttgagcaaagtgaatcctaatgttcaagta
tctgttttttctgcaacaattccacctgagttaaaaccttttttaatcaagtatttaaaa
aatcctcattatttagatttaaatgccaatcaaataacaaatcaaaacattacacatatt
ttaattccaacaaaaaatcaagaacgagaaacaattttattaaaacttttaaaaacattt
gatccatatttatgtttaatttttgttaataaaaaaacagatattaataagtattatgat
ttgttattaaaacataattattctgttatccaattacatgctggattagaaccacgatta
cgaacacaagttgttaaacgaattcgaaatttagaatataagcatgctattgccagtgat
attgcagcgcgtggaattgattttattggtgttagtcatgttatttcaattgatttacca
aatgatttagaatattatattcatcgtagtggtcgtactggacgggcaaattatactggt
tatagttatgttctttatgatacaaaaaatttaaatttagtccaacaattaatgacaaaa
ggaattacttttaaaacaaagaaatgaaatcaacaaggagaattggttgaaacagttctt
agtgatgataggcctaaaaaacaatcttcttttgcagttgagaatgaaattaataaaatt
attaatcgttataaaacaaaagataataataaaaaaattaaacctggttataagaaaaaa
cgaaaagcggaaattgatgaatttaaaaaacaagttcgtcgtagtcacattaaagaatca
attaaaaaaaagaacgagcaaataaattatttaataaagattaaaaagaaaacttaa
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