Saccoglossus kowalevskii (acorn worm): 100303496
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Entry
100303496 CDS
T04123
Symbol
sox1/2/3
Name
(RefSeq) SRY (sex determining region Y)-box 1/2/3-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100303496 (sox1/2/3)
Transcription factors [BR:
sko03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100303496 (sox1/2/3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
100303496
NCBI-ProteinID:
NP_001158377
UniProt:
Q7YTD4
LinkDB
All DBs
Position
Un
AA seq
316 aa
AA seq
DB search
MMEQTDLKQVSMMGSGQICSSNPTTPTSSSANKMLGPDRVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMK
KDKYGLPGMISPGGGAPVQRAVDGMQYPLNGYMNGGYPMMQPDQLSAHTYQPHSLASAQS
QMAQANGGLHPRYDMPSQIYTPMCTAGSYVNPPTSYTMTAPYTTQHNQMHQSPAAVGISK
SEPMVSAATAAAVAANRGRSCPGDLREMISMYLPGDANDPNARQHSNAMVAHQEQYSQNP
SGVGVNGVSHYDHELK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacaaacggacttgaagcaggtttccatgatgggctcaggtcagatttgcagt
tcgaacccgactactccaacctccagttccgccaacaaaatgctgggacctgaccgtgtc
aaacgtccgatgaatgccttcatggtgtggtcccgtggacagcgacgtaagatggcgcag
gagaaccccaaaatgcataactctgagattagtaaacgacttggggccgaatggaagttg
ctgtcggaggctgagaagcgaccatttatcgacgaggccaagcgacttcgggccgtacac
atgaaggaacaccccgattacaaataccgaccaagacgcaagacgaagacacttatgaag
aaagataagtatggactccccggtatgatttcacccggtggtggggctcctgttcaacgg
gccgtcgatggtatgcagtatccactcaatggttacatgaatggtggctacccaatgatg
caaccagaccaactgtcagcgcacacatatcaaccccatagcctcgctagcgctcaatca
caaatggcgcaggctaatggcggacttcacccgcgctatgacatgccaagtcaaatttac
acacctatgtgtacagccggctcctatgtcaacccgccgacgagttacactatgacagca
ccttacacaacacaacacaaccaaatgcaccagtctccggcagcggtgggaatctccaaa
tcagaaccaatggtgagtgcggcgacggcggcagcagtagcagcgaaccgaggaaggagc
tgtccgggcgatttgagagaaatgatttccatgtacctaccgggtgatgccaacgaccca
aatgctcgtcaacacagcaatgccatggtggcacaccaagaacaatattcacagaatccg
tcaggagtcggggtaaacggtgtctctcactacgaccacgaattaaaatga
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