Saccoglossus kowalevskii (acorn worm): 100303565 Help Entry 100303565         CDS       T04123                                  Symbol NFkB Name (RefSeq) nuclear factor kappa-B   KO K02580   nuclear factor NF-kappa-B p105 subunit Organism sko  Saccoglossus kowalevskii (acorn worm) Pathway sko04620   Toll-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:sko00001]  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100303565 (NFkB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sko03000]     100303565 (NFkB) Transcription factors [BR:sko03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    RHR (Rel homology region) Rel/Ankyrin     100303565 (NFkB) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RHD_DNA_bind Ank_2 RHD_dimer Ank Ank_5 Ank_4 Ank_3 Death Ank_KRIT1 Motif Other DBs NCBI-GeneID:  100303565 NCBI-ProteinID:  NP_001158473 UniProt:  B5M235 LinkDB All DBs Position Un AA seq 1094 aa AA seqDB search MNENTDNFEIPNELMNNWIANGDVVSVSTDITMLENMTQGTSDSNKAEPSQPDDAPRLVI LTEPKARGFRFRYGCEGGSHGGLPGADSERGRKTYPAVKILNYQGMARIVVSLVTNDSIP TPHAHSLVGKQCDDGICTVQVGPTDMTASFPNLGIRHVTKKQVPDVLRKRISESDRLFRE FLSDPGTPLTEAEVADRAKQQASDMDLSVVRLCFQAYLADGSGSYTRQLDAVVSKPVYDS KAPNASQLKICRMDRSSGCCTGGDEVYLLCDKVQKDDIQVRFFEDNGNGDVWEQMGDFGP TDVHRQYAIVFKTPKYRNIAIDRPVSVMVQLRRKSDSEVSEPKPFTYHPQQFDKEEVSKK RKKTLPYFGDHLGGGPSGSGMGGSGGGSTYGSTSFAFGGGGGFQGFTAGGVQGLQRGGGG QMGDQRWGQSLQSVMTTYQSQAPLQDDRLLARSAVGPHHVMPQVVSLDRSKIERRSRDYS DDADVGIDCDDDLVTDAAPFTDDDLMQQKMASLGLSDRDNLVEPYSTGLSMCFEETKAKR IDSMVSLEYDETKLLKTENEKPTVSVAVGAVQTDPLPLPSVQINTATMELAERTSAALRD FCVTGDVKILLAVQRHLTAVQDENGDSALHLAVIHGHVEVVHSLLSVIISIPQQQIVNRY NNLRQTPLHLAVITGQPEAVELLLRCGADVSKLDRHGNTAAHLAAELGSVNCLKVLLRQQ RELKEGKRYPELDWKNYEGFTCVHLAVKAGSLNCLRSLVSVGANVNEPDGKSGHTALHHA VEHEHLGIIGYLILEAQSDLHAQNFAGDTVLHIASGRQMYNVAALLVAAGSDPWMENYEP LEESEDEEQEKEIDTSDDDSYGETSLDLAMDDQMAKILKGEPYHPSILSKSSHISAVPMA THSEKTTSQSPSSFDVGYYSVSRSTALSDSMSEWSSHISKGDMIKLDPIVRNSLLKLLDV PRDNCCDWRSVAEELCLGNMINAFKLSSSPTKILLDNFEAIGGTIEQLQQALYVLNRKDA LKVLEEAGFPFKLTITQEKERDVKGVIPESCESGLGSIQASMISRSDEASGMTVLPSNQS SQHLPDINQPTEAH NT seq 3285 nt NT seq  +upstreamnt  +downstreamnt atgaacgagaatacagataactttgagattccgaatgagttgatgaataattggattgcc aatggtgacgtggtgagcgtgtcaactgatattaccatgttggagaacatgacgcaaggt acctctgattcgaataaggcagagccatcacagcctgatgatgcacctcggctagttatc ttgacagaaccaaaggcgaggggatttcgtttccgatatggttgtgagggtggttctcat ggtggacttccaggagctgatagtgaaagaggacgaaaaacttaccctgcagtcaaaatt ttaaattatcaaggaatggctcgaattgtagtgagtctggtaaccaatgattctatccca acaccacatgcacacagtcttgtcggcaaacaatgtgacgatggaatttgtaccgtccaa gttggaccgactgatatgacagccagctttccaaatttaggtatccggcacgttacgaaa aaacaggttccagacgtgttgagaaaaagaatttctgagtctgatagattatttcgagaa tttctttcggatccgggtacaccattaacagaagcagaagttgccgatcgtgccaaacag caagcaagcgatatggatttgtcagtcgtacgactgtgttttcaagcatatttagccgat ggtagcggcagttatacaagacagttggatgcagtcgtatctaagccagtttatgacagt aaggcacctaacgcatcgcagttgaagatctgtcgcatggatcgttcgtctggatgttgt actggcggagatgaggtatatcttttatgcgataaagttcaaaaagatgatattcaggtc cggttctttgaagataatggtaatggagatgtgtgggaacagatgggggactttggtccc actgatgtacatagacagtatgccattgtttttaagactccaaaatatcgtaatattgca attgatcgacctgtcagtgttatggttcaacttagaagaaagtctgattctgaagtgagt gagcctaaaccgttcacgtaccatccacaacaatttgacaaagaagaagtgagcaagaaa aggaaaaagactcttccatattttggagatcaccttggtgggggaccgagtgggagtgga atgggtggaagtggaggagggagtacctatggcagtacttcgtttgcgtttggtggtggg ggcggattccaaggatttactgcaggcggagtgcaaggtttacaacgaggcgggggtgga caaatgggtgatcagaggtgggggcagagcctgcagtctgtgatgactacctaccaatct caagcaccactacaagatgacagactacttgcccgtagtgctgtcggacctcatcatgtg atgccacaggttgtcagccttgatagaagtaaaatcgaacgccgatctcgtgattactca gacgatgctgatgtaggaattgattgtgatgatgatcttgttactgatgctgctccattc acagatgatgatcttatgcagcagaaaatggcgagtttagggttgtctgacagagacaat cttgtagagccatatagcactggactgtctatgtgttttgaggaaacgaaagctaaacga attgattcaatggtatcattagaatatgatgaaacaaaactgctcaaaacagaaaatgag aaacctacagtttcagttgcagtaggtgcagttcagacggatccgctgcctctgccttcc gtacagatcaatacagctacaatggagctagcagaacggacatcagctgcattaagagat ttctgtgtcacaggcgatgtcaaaatactgttagctgtacaaagacatcttactgccgta caggatgaaaacggtgattcggcattacatttggctgtgattcacggtcatgtcgaagtt gtccacagtttgctgagtgtcattatcagtataccgcaacaacaaattgtcaaccgctac aacaaccttcgacagactccccttcatctggctgtcatcaccggccaacctgaagctgtt gaattgttactaagatgcggagctgatgtgtcgaaacttgatcgtcatggcaacactgca gctcatcttgctgccgagttgggtagtgtaaactgtttgaaggtgttactaaggcaacag agagaactaaaagaaggtaaaagatatcccgaattagactggaagaactatgaaggtttt acctgtgttcatcttgctgttaaagctggtagtctgaactgtttacgatccttagtttct gttggagccaatgtcaatgaaccggatggtaaaagtggacacacagccttgcaccatgct gtagaacatgaacatttaggaattattggatatcttatactagaagcacagtctgatcta catgctcagaacttcgctggtgatacagtattacacatcgctagcggccgtcagatgtac aatgtagccgctttgttggtggctgcgggatctgacccatggatggagaattacgaacca ttagaggaatcggaagatgaagaacaagagaaagaaatagatacgtcagatgatgattct tatggagaaacgtcacttgatttagccatggatgatcagatggcaaaaattctcaaaggt gagccgtatcatccgtcaatattaagtaaatcatcgcacatttctgctgttcctatggca actcacagtgaaaaaacaacgtctcagtcgcccagtagttttgatgtcgggtattactcg gtttcaagatcaactgcactctctgattccatgtcagaatggagtagccacatcagtaaa ggagacatgattaaattggatcctattgtacgtaacagtctattaaaactattggacgtc ccaagggacaactgctgtgattggagatcagtcgctgaggaactttgccttggaaacatg ataaatgcttttaaattgtcatctagccccacaaaaatacttcttgataattttgaggca atcggtggaactattgaacagttgcagcaggcactttatgttttaaaccgaaaagatgcc ctgaaggttctagaggaagctggatttccttttaaactaaccatcacacaagaaaaagag cgagatgtgaaaggggtgatacccgaaagctgtgaatctgggctgggttcgatacaagct tcaatgatatcaagatctgatgaagcttctggtatgactgtgttgcctagcaaccagtcg tcgcagcatttaccagatataaaccaacccacagaggcacattga

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