Saccoglossus kowalevskii (acorn worm): 100313568
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Entry
100313568 CDS
T04123
Name
(RefSeq) capicua-like transcription factor
KO
K20225
capicua transcriptional repressor
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100313568
Transcription factors [BR:
sko03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100313568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
DUF4537
Motif
Other DBs
NCBI-GeneID:
100313568
NCBI-ProteinID:
XP_002740950
LinkDB
All DBs
Position
Un
AA seq
2748 aa
AA seq
DB search
MNRKGEKSRRTKKSPPHSGKDDSPAPLGGRTKSKRNKPTDVSGEESDEKSDERNLVNKKG
RASQRMSPKPSSQIERSVGSPGQNKRNLKQKTITRKRKGNPEDSDSDVESLQHSSSSNSR
DEGAFEKTPLSVGRKISKARLSVGEISESVVTKLAVDFKAYKAHRVLAKREGSFQPGIIK
QHKKNKDLGVLFDGDRNLTYFADILEKQSIDIISDTIPSPGSVAVGTRVCARISQDENMF
CEGIVTEISSRPLSYHVALDNDKNEVGSGEEGESVWVPRSNLRLLRAPWEAENAPQTQPV
RQLKYEVEMKKEDIESEDSGDEMRKFSFESSESSTAPSPHLLPGSPVKRGRGKDRRQPIK
KCETNSRSSTVSSERSSSTVSPATTPQPKYKKGDVVCAPNGIRKKFNGKQWRRLCSKDGC
TKESQRRGYCSRHLSLRGKSLRDPSGFPGRRKGLLKDQELEWEESGTSQSDSSIRTDSRP
LIDASKFDMDETEAANMLVSLGNSRSGTPCFSPVPTPGPMSPRSHSQSSSPHFNFRGPSA
TFSPISIYPQPTQRGVVITPTRRWSTSTPKSGRSSTEMISPSGNRIVSGTTPTFQAHLNF
TSPISPTKLKTKMENYKNMPRTELNKSSDGNDSGVDVTGQTRSPTPALTVSPTYSRQQQV
ISPPNIISPSMVARQHTWQSSQIQTAIISSIHETRTQAGFVPPPIAPLQRNSQESSPPER
NRNTVRTERPAVPPVRPAPQSVESTERKETTDSQTQTTQDSEDQPPQHSELANQSVGQPQ
QSEQQNHSQGTLLQQSGPAHPTPSALLPVIATGQSEDEGKPGKPDSAWTQLSANALQVFP
WHTLVPILTPGQPPTNNLPVSVQQPTVNHQTLPNQSQENNMDSMSANMPSQVSDHQYRSN
EIDVDLDKDTFTGTLLAPATSPCGKRRTQSLSALPKEGTDKEPRSPRKVRDKDHIRRPMN
AFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHP
DWKWCNKDRKKSTSGTLGGGLRKLEKERKISLDDGVLISPISTVAPIQDITSLEIFTTVG
GESVEKLDRGKIVAAKDDQYIPDEEKPARLAARKKRSQSMSQVPTTSHEHQQMEKRQEEL
RQQFIQQRLQQKQKDEQQREKWGLGAKRDDPTGESQALAELAQMCSTRLQDGGSKRSPQK
TMPQLQSRKERLESEEMTSDDERMVICEEGDDDVIADDEVSNVQHPGHIDLKCQERVSDS
DTDSQSEEEGLIENKAFPQQRFSPVMKRLSSSDITYRPKPVKPDSSSPIRSQLSGVDHQI
RNQLTGLDQPIRSQLSGLDHPDGSMGMVNAGVGHLAENQPKRPTQSGSGFQPKGAAFKAH
SPKARVLEQFKLSTTSKAFKEYIPSKSPHIRNEDEMVTSKPGQHLMSTLHLAKSGAIHSG
KPVTMPVLTSIATAGVSTVYMSGLPHIPLTPSTGMQPKLMTEKPHIGTILSTMKPGMWPI
GIQQAQMTQPTHVQTQAHVQTQAHVQTQSHVQTQSHAQTQAHIQTQAHIQTQAHIQTQSH
AQTQAHIQTQAQVQTQAHIQTQAQVQTPMTQNVPLVGKVQLASIAQPVNFTAGRSTMTTM
SVASKPIATPILIASKPSGQARPLCSTISGIQQGNVTGMMGGLPATQTFTQLAKTAALPH
TFVNVANTQKPGNIVMTGPQFKPGVSGALMNVLSSSVTMSATKLLPTQPTTAVCQVNTSQ
IPLTTVRTIPQLQKQLPHAQLTSPNVQHPALVTNFVLKANPTTSSVLTPTQALVSSQQLP
GTPGTPGTPGHVNISQSQVPHGGITQFQYIVPTQIAQGAKLQSSSLQLASSPNASGIQLT
TGNNIAIKTIPGKPITLQTSGNHGNMMSTTTAVPGHQVTEPSNSVLPSTMPSSLIAPQLF
ASNKIQSFVPVMSSQVTLPSQVLTVAQPVTMATVSQPVSIATMVNQPLTTSVVSQPVTIA
TGIVNQHLVPNTQVTMATPMIQANQSHRLLLPSTQRFAYIQHPGPPGSPASVVMATEPGP
GNIAKTLSETHKLQTAYLPATAAYMGAAIPHARIQAQIVPVPQPQVSQTSIRPVTMGTVS
LAAQHANLQSVMTTVATTTAPVSSSPMQVVPAVPTHQTLKANIVSQTSQYYRGTVSIKPS
TVASATTTESKQDNGIHGVKRVKASVATIPVACTSSYQPVTVQAGQLQQQIPISTAVTSV
AMESGIPKKLPQPQKDLHSKFFGTVLPSTPGSPHRVSLHSAVPPGSPHRVSLHSAVPPGS
PHRVSLHSAVPPGSPHRVSLHSAVPPGSPHRVSLHSVVPPGSPHRVSLHSTAPSGSPRII
PGISSIVPVIPTLHSKVEGGGSLDKEEKPQRSCKGKRYKEIVDESGVKAVKKDKKVSESE
DNACRAETDRPQGQKPLLLPTQGLPSLETKSEFNRELPTTPKGKLKRTLSSDMRSSLLDP
ETPSTPTKGILKRNIDDGMEMVLEEVNFEARFAELPEYHPEDHRSEVTKLKSPRELVGSY
RRKRKNSTGKLEYDSGTDTDPMSPKLKQRRHSSSSEPGTPGQRTIGEDNVFQWGEKAIAA
AGSGSSLDALAEVAAMQRAAGKDEDEEGDVEGGGEKAPYSSLRRTLDQRRTLVMQLFEEH
GYFPSGQATTAFQARYKETFPTKTCLQLKIREVRQKIMQQHQHQQQEEMQPGTTVPHTTM
AVAQLPVGLQFHSSQLYPPSLAPPAQHQPPPPPQSQIPVTAVPTSTTK
NT seq
8247 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggaaaggtgagaaatcgcgacgtaccaagaaatcccctccccatagtggcaaa
gacgattcaccagcaccgctcggtggacgtactaagtcaaagagaaacaaacccaccgac
gtcagtggtgaagaaagtgatgaaaagtcagacgagagaaatttagtaaataaaaaagga
agggcatcccagagaatgtctcccaagcccagttcacaaatagaacgctctgttggatca
ccagggcagaataaaaggaatttgaaacagaaaactattacaagaaaaagaaaaggcaat
ccagaagatagcgattcagatgtagaaagtttacagcactcgagcagtagcaatagtaga
gacgaaggagcatttgagaaaactcctctgtcagttggcagaaaaatttcaaaagcaaga
ctctcagttggtgaaataagtgaaagtgtggtaacaaaactggcagtggatttcaaagcg
tataaagctcacagagttcttgcaaaacgagaagggtccttccaaccaggaattattaaa
caacacaagaaaaacaaagaccttggtgtcttatttgatggtgatcgaaatttaacatat
tttgctgatatattggaaaaacagagtattgacatcatcagtgatactattccatcacct
ggtagtgttgccgtgggaacaagagtgtgtgcacggatcagtcaggatgagaatatgttc
tgtgagggcattgtaacagagataagttcacgtccactttcgtatcatgttgccttggat
aatgataaaaatgaggtagggtctggagaggaaggcgagtcagtctgggttccacgatca
aatttacgactactcagggctccatgggaagcagagaatgctcctcaaacacaaccagtg
cgtcaactcaagtatgaggttgaaatgaaaaaagaagatatagagagtgaagactcagga
gatgagatgagaaagtttagttttgaatcgagtgagagttcaacagcaccttcacctcat
ttgctacctggctcaccggtcaaacgtgggcgtggcaaagaccgcagacaacctatcaag
aaatgtgaaacgaacagtcgtagcagcactgtgtcatcagagagaagcagtagtacagtt
tccccagcaacaacacctcaaccaaaatacaagaagggagatgttgtttgtgctcccaat
ggaatacgaaaaaaattcaacggtaaacagtggaggaggctgtgttcaaaagacggttgt
actaaagaatcccagagaaggggttattgctcacgtcatctttcattacgtggtaaaagt
ctgcgggatcccagtgggtttcctggacggagaaaaggactactaaaggaccaggaactt
gaatgggaggaatcggggacatcacagagtgattcaagcattagaacagattcacggcca
cttattgatgcttcaaagtttgatatggacgagacagaggctgccaatatgttggtttca
ctcggcaactccaggtctggaacaccttgtttttcacctgtaccaacaccaggtccgatg
tcacccagatctcactcacagtcttcatcaccacatttcaatttcagaggaccctctgct
acattcagtcctatatcaatttacccacaaccaacacagcgaggtgttgttataacaccc
acacgtcgatggagtacaagtacgccaaaatctggtcgttcatcgactgagatgatttca
cctagcggcaatcgcattgtctcaggtacaacacccacatttcaagcgcatttgaacttc
acctccccaatcagccctaccaaactgaaaaccaaaatggagaactataagaacatgccg
agaacagaacttaataagagtagtgatggcaatgactctggcgtggatgtgactggtcag
acgcgaagtccgacaccggcacttacagtgtcgccaacatattctcgtcaacaacaagtt
atctctccccctaacataatatcaccaagtatggttgctaggcaacatacatggcagtct
tcacaaatacaaacagcgattattagtagcattcatgaaacgcggactcaggcgggtttt
gtaccaccccctatagcaccgctgcaaagaaactcacaagaatcgtcaccaccagagaga
aatcgaaatacagtgagaactgaaagacctgcagtcccacctgttaggccagcaccacaa
tctgttgagtccacagagaggaaagaaacaacagactcacaaacacagaccactcaggac
agtgaagatcaaccacctcagcactctgagttagctaatcagagtgttggacagccacag
caatctgaacaacaaaatcatagccaggggaccctgttacaacaatctggaccagcccac
ccaactccatctgctttgttaccagttattgctacaggacaaagtgaagatgaaggaaaa
ccaggaaaacctgactcagcttggactcagctgtctgctaatgcattacaagtatttcca
tggcataccttagtaccaattctgacacctggacaaccaccgaccaataatctaccagtg
tctgtacagcaaccaactgtcaatcaccaaacattacccaatcagagccaagaaaacaac
atggacagcatgtcggcaaatatgccatcacaggtatcagaccaccagtacagaagtaat
gaaattgacgtagacttggataaagacacatttactggcacattattggctcctgccaca
tcaccatgcggtaagagacgtactcagtcactgagcgctttaccaaaggaaggtacagac
aaagaaccaagaagtcctagaaaggtgcgtgacaaagaccatattcgtcggccgatgaat
gcgtttatgatattcagtaaacgtcatagggctttggtgcatcagcgccaccccaatcaa
gacaaccgaacagttagtaagattcttggggaatggtggtatgcactgggacctaaagaa
aaacagaaatatcatgatttagcatttcaggtaaaagaagctcactttaaagctcaccct
gactggaaatggtgcaataaggacagaaagaaatccacaagtggaacattaggtggcggt
cttcgtaaacttgaaaaagaacggaaaatctcgcttgatgatggcgtattgatatcacca
attagtactgtggctccaatacaggatatcacttctttagaaatatttaccactgttggg
ggggaaagtgtggaaaaacttgatcggggtaaaatagttgctgccaaagatgatcagtat
attcctgatgaagagaaacctgctcggcttgctgctcgaaaaaagcgatcacagagcatg
tcccaagtgccgaccacgtcacacgagcaccagcagatggagaaacgtcaggaagagctg
cgccaacagtttatacaacaacgactgcagcaaaaacagaaagatgaacagcagcgagag
aagtggggtttgggagcgaagagagatgacccaacaggagagagtcaggcattggctgaa
cttgcacagatgtgttcaacaagactacaagatggtggttccaagagaagcccacagaaa
accatgccacaactacagagtaggaaagaaagactggagtcagaagaaatgaccagtgat
gatgaaaggatggtcatttgtgaggagggtgatgatgatgtcattgctgatgatgaagtt
agtaatgtacaacatcctggacatattgacctgaaatgtcaagaacgtgtgtcagactca
gatacagatagccaatcggaagaagagggtttaatcgagaacaaagcgtttccgcagcaa
cgcttttcacctgttatgaagagactttcttcatcggatatcacatatcgaccaaaacct
gtcaaaccagactcttcatcaccaatcagaagccagctatcaggagtggatcaccaaatc
agaaaccagctaacaggattggatcagccaatcagaagccagctttcaggattggatcac
cctgatggatcaatgggtatggttaatgctggggtcggccatcttgcagagaatcaacca
aaaaggccgactcagagcggaagtggatttcaaccgaaaggagcagcattcaaagcccac
tcaccaaaggcaagggtcttagaacaatttaaattgtctacaacaagcaaggcttttaaa
gaatatataccaagtaaaagtccacatataagaaatgaagatgaaatggtgacgtcaaag
ccaggtcagcaccttatgtcaactttacatttagcgaaaagtggagctatacatagtggt
aaacctgtgacaatgccggtattaacatctattgccacggctggagtcagtacggtctac
atgtctgggttgccgcatattcctctcactccaagtactggaatgcaaccaaagttaatg
actgagaaaccacacatcggcacaattctctctacaatgaaacctggaatgtggccaatt
ggaatccaacaagcacagatgacacagccaacacatgtccagacacaggcacacgtccag
acccaggcacacgtccagacacagtcacacgtccagacacagtcacacgcccagacacag
gcacacatccagacacaggcacacatccagacacaggcacacatccagacacagtcacac
gcccagacacaggcacacatccagacacaggcacaagtccagacacaggcacacatccag
acacaggcacaagtccagactccgatgactcaaaatgtaccacttgtagggaaagttcag
ttggccagcattgctcaacctgtgaatttcactgctggtagaagtacaatgacaacaatg
tctgtagcatccaaaccaatcgctacacccatacttatcgcttcaaaaccaagtggtcag
gctagaccattgtgcagcaccatcagtggcatacaacaaggcaatgtgacaggaatgatg
ggaggtttacctgccactcagacatttacacaattagcaaaaactgctgcacttccccat
acttttgtcaatgttgctaatactcagaaacctggcaatatagttatgactggaccacag
tttaaacctggtgtatctggtgcgctcatgaatgtgctgtcctcatctgtcactatgagt
gctactaaacttctaccaacgcagcccacgacagctgtgtgtcaggttaacacctctcag
attccactgacaacagtcaggaccataccacagctacaaaaacaattaccacatgcgcag
ctcacgagtccgaatgttcagcatccagcattagtcaccaattttgttctgaaagcaaat
ccaacaacatcatcagtactcacgcctacccaggctcttgtatccagtcagcaactacca
ggtacaccaggcacacctggcactccaggtcatgtaaacatctcgcaaagtcaagtacca
cacggcggtatcacacagtttcaatacatcgttccaacacagattgcacaaggagctaaa
ctccaatcttcatcactgcagctagcgagttcgccaaatgcatcaggaattcaactgacc
accgggaacaatattgcaataaagactattccgggaaaacctattacattacagacatcg
ggtaaccatggaaacatgatgagcacaacaacagctgtacctgggcaccaggtcactgaa
cctagcaactctgtattacctagtacaatgccaagcagtttaatagcaccacaactattt
gcaagcaacaaaatccaatcttttgttcctgtgatgtcatcgcaggttactttaccatct
caagttctgactgttgctcagcctgtcactatggcaactgtaagccagcctgtctcaata
gcaacaatggtaaatcaaccgctcacgacttccgttgttagccaacctgtaaccatagca
acagggattgtcaatcaacaccttgttccaaatacacaggttaccatggcaacacctatg
attcaagcaaatcagtcacatcgtttattgctgccatcaacacaaagatttgcatatatt
cagcatcctggcccaccaggttctccagctagtgttgtcatggcgactgaaccaggacca
ggtaatatcgctaagacacttagtgaaacacacaaacttcaaacagcctacttacctgct
actgctgcatacatgggtgctgctattcctcatgctcgtattcaagcccaaattgttcct
gttccacaacctcaggtatctcaaacatctatcagaccagttactatgggaacagtctcc
ctcgctgcacaacatgcaaaccttcaatctgtgatgacaactgttgctacgacaactgca
ccagtttcatccagtccaatgcaagttgttccagcagtaccgactcatcagactttaaaa
gcaaatattgtatcacagacttctcagtactacagaggtactgtgagcatcaaaccttcc
acagtggcatctgcgactacaacagagtctaaacaagataatggaattcatggagtgaaa
cgagtcaaggcatccgtcgctacgattcctgtcgcttgcacaagttcctatcagcctgtc
actgtacaggcaggacagctacaacaacaaatccctatatctactgctgtaacatctgtt
gccatggaaagtggtattcctaagaaattaccgcaacctcagaaagacttgcatagtaaa
tttttcggaactgtgttaccatcaacacctggcagtcctcatagagtgtctttgcacagc
gcagtcccccctggcagccctcatagagtgtctttgcacagcgcagtcccccctggcagc
cctcatagagtgtctttgcacagcgcagttccccctggaagccctcatagagtgtctttg
cacagcgcagtcccccctggaagccctcatagagtgtctttgcatagtgtagtcccccct
ggcagccctcatagagtatctttgcacagtactgcaccttctggcagccctcgcataatc
ccgggaatatctagtatagttcctgtcattcccacactgcatagcaaagttgagggggga
ggaagtctggataaggaggaaaaaccacagcgatcatgcaaggggaaacgttacaaagaa
attgttgatgaatctggcgtgaaagctgttaagaaggacaaaaaggtgagtgaaagtgaa
gataatgcctgccgagcagagactgacagacctcaaggacaaaaacctttactgttacca
acacagggtttaccttcgttggagacaaagagtgagtttaaccgtgagttgccgaccaca
ccgaagggaaagctaaaacggactttatcaagtgacatgaggtcaagtctcttggatcca
gaaacaccatctacacctacaaagggaattcttaaaaggaatattgatgatggaatggaa
atggtgttagaggaagtgaactttgaagccagatttgcagagctacctgaataccatcca
gaggatcatcgatccgaagttactaagttaaaatcaccaagagaacttgtcggcagttac
agaagaaagagaaaaaattctacaggtaaattggagtatgattcgggtacagatactgat
cccatgtcaccaaaattaaaacagagacggcattccagtagttcggaacctggcactcct
ggacagcgtacaattggagaggataatgtattccagtggggtgagaaggcaattgcagca
gccggaagtgggtccagtcttgatgctctggctgaagttgccgcaatgcaacgtgctgca
ggtaaagatgaagatgaagaaggtgatgttgaaggaggtggagagaaagcaccttactcg
tcacttagaagaactctagatcaacgtcgtacattggtaatgcagttatttgaagagcat
ggatactttccatctggacaagcaactacagcatttcaagctcgttacaaagagactttc
ccgactaaaacatgtctgcaattaaagatacgtgaagtacgacaaaagataatgcagcaa
caccagcaccagcagcaggaagaaatgcagcctggcacgactgttcctcatactactatg
gctgttgcacagctgcctgtagggttgcaatttcactcatcgcagctttatcctccttca
cttgcacccccagcacagcatcagcctcccccgccaccacagtctcaaatcccagtgact
gctgtacctacctcaactacaaagtaa
DBGET
integrated database retrieval system
