Saccoglossus kowalevskii (acorn worm): 100313733
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Entry
100313733 CDS
T04123
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100313733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sko00536
]
100313733
Glycosaminoglycan binding proteins [BR:
sko00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100313733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
Laminin_G_2
Laminin_G_1
LRR_5
hEGF
LRR_9
EGF_TEN
LRRNT
LRRCT
LRR_14
EGF_2
EGF_Teneurin
LRR_EndoS
EGF_3
EGF_DL_JAG
EGF_TGFA-like
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100313733
NCBI-ProteinID:
XP_002738338
UniProt:
A0ABM0GVN9
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MVIQRKLFRGAGAIKNLQMDHNQISCFHNGAFRPLRNLEILTLNNNNITTLETNAFLQMN
RLTTLRMAYNDFSCDCHLSWVGRFLRMHPTLALFTRCQEPRSLKYVKVAELQDVDFKCNG
LEKDHATLCKIEPLCPAKCSCLGGVVDCRGKGLTQVPEIFPENTIELRLEQNQIVRIESR
SFNTYKKLRRIDLSNNLISSLADDAFSGLKALNSLVLYGNKISELPAGLLKGLTSLQLLL
LNANKITCLRVDTFRDLSALNLLSLYDNDIKSIANGTFMPLVSVQTLHLAKNPFICDCNL
KWLSEYLHNNPGIETSGARCENPRRMSNKRIGQVKPVKFKCKGSEEYRTKQAGQCIIDTD
CPAQCLCEGTIIDCSAIGLKEVPDDIPGFATELRLNDNEITKVSATGIFLRLPELRKLDL
RNNRISVIEDGAFIGAVMLSDLLLTNNKLSKVKGSMFVGVRNLKTIMLRSNQISCINNET
FSGLTKVRLLSLYDNQIRTVMPGSFDNLKELSTLNLLSNPFNCNCHLGWLADWLKSRTIV
TGNPRCQAPSHLREIPIQDLKKYDFSCDSNNDNSCLPSLACPRNCACYGTVVRCSNKQLT
NPPYNIPNETTELYLDVNKLKSIPDLSRLKNLHTIDLSNNDITTITNTTFANLPKLATLI
LSYNHIGCIPPGTFRGLHSLRILSLHGNDISTLPSGAFDELESLSHIALGANPLYCDCSL
RWLSDWVKSGFKEPGIARCSGPYNLQEKLLLTAPTRKFECNEIPDLSILAKCNPCLAEPC
LNDGECHNGEYAGYICKCASGFKGQNCEEEINECDNEPCKNGATCYKQKKDFSCECPIGF
VGDFCEDNINDCLLNNCMNNATCIDAVNNYTCQCSPGFTGVFCETDINFCELFINPCKNG
GTCVDLVNEYRCDCPEGYVDVHCSSTNQNCKDVKCQNGGTCVDDEKEDYTCKCPSGFNGP
HCEYSPRVFSQHTSPCQYQDCKNNGQCYYNNVTGNYGCNCLPGFHGDKCEMIISVTFTQK
DSYVQYHKLENKPKANITMVFATRQENGILFYNGLMDHIAVELFYGRVRVSYDVGNYPVS
TMFSYEKINDGNFHSLEILAVKQNITMRVDDGNPNTATNKGDNEYLNVETPLYIGGLPEE
VIKGPAVRLVHVRNGTSFNGCMRTVLLNGEYLDYTKSEEMQGIAPGCPTYDKPDPCIMHM
CKQGFCRALDTYSYVCDCLDGWMGAKCDNPTTCVGQHYREVIEDEDGCKSRRLIENMRCA
GECGNSCCRPQRVRRRKVTLQCEDGTSRSKQIDVTKTCACQWCGDLT
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggtgatacaaagaaaacttttcagaggagctggtgcaataaaaaatctacaaatggac
cataatcaaatttcatgtttccataatggagctttcagacctttgagaaacttggaaata
ttaaccctgaataataacaatattacaacattggagaccaatgcattcttacaaatgaac
agactcaccacactgagaatggcatataatgatttttcatgcgactgccacttatcgtgg
gttggacgatttttacgaatgcacccgactttagcgttgttcactagatgtcaggaaccg
aggagtttaaaatatgtgaaagtggccgaactgcaagacgtagatttcaaatgcaatggt
ttggagaaagatcatgctacactttgtaagatagaacctttatgtccagccaagtgttca
tgccttggtggtgtagtagattgtagagggaaaggtctcacacaagtaccggaaatattt
cctgagaacaccatagaactgagactggaacagaaccagattgtaagaatcgaatcaaga
tcatttaatacttacaaaaagttgagaagaatagacctgagtaataatttgatatctagt
ttggctgatgatgcatttagtggactaaaagcattgaactcactggtactgtatggtaat
aagatttccgaacttcccgctggattattaaaaggactgacatcgttgcagttattactg
ttaaacgctaataagataacgtgtttacgagtggatacatttcgtgatctctctgctctc
aatcttctgtcattatatgacaatgatatcaagtctattgcgaacggaacttttatgccg
cttgtcagcgtacaaacattacacttagccaaaaatcctttcatttgtgactgtaatttg
aaatggctgtcggaatatttgcacaataatcctggaatagaaacaagtggtgcacgatgt
gaaaacccacgaagaatgagcaacaaaagaattggacaagtcaaacccgtaaagttcaag
tgcaaaggttctgaagaataccgcacaaaacaagcaggacagtgtatcattgatacggat
tgtcctgcgcaatgtttatgtgaaggcactattattgactgctctgctatcggattaaaa
gaggtaccggacgacattccaggatttgccacagaactacgattgaacgacaatgaaata
acaaaggtttcagctactggtatatttctcagacttccagaactaagaaaattggatctc
cgcaacaatagaatcagtgtgattgaagatggcgctttcattggtgctgtgatgttatct
gacttactgttaacaaataacaagctgagcaaagttaagggaagcatgtttgttggagtt
agaaatttaaaaacaataatgctacgtagtaaccagatctcctgcatcaacaatgaaacg
ttctcgggtttaacaaaagtcagactgctatcattgtatgacaatcagataaggactgtg
atgccaggttcatttgataatcttaaagaactctccactctaaacctgctgtccaatccg
tttaactgtaactgtcatttaggatggctagctgattggttgaaatcacgtactattgtt
acggggaatccaagatgtcaggctccttctcatcttcgagaaataccaatacaggatctt
aaaaaatatgacttcagttgtgacagtaacaatgacaacagttgtctaccgtctcttgct
tgtccacggaattgtgcgtgttatggtactgtggttcgatgcagtaataaacaactgact
aaccctccatataatatacctaatgaaacaactgaactctatctggatgtcaataaattg
aagtctattcctgatttgtcacgcctgaaaaacctccacacaattgatttgagtaataat
gatatcaccaccatcacgaacactacctttgcaaacttacccaagcttgcaacattaatc
ctaagctacaaccatattggctgtatacctcctggtacattcagaggtctccattccctg
cgcatattatctctccatggtaacgacatctctactcttccatcaggagcattcgatgaa
ctagagtcgctttcgcatattgcccttggtgccaatccactttactgtgattgtagtttg
agatggttgtcagactgggtaaaatctggtttcaaggagccaggtattgcacgatgttct
ggtccatacaatttgcaagaaaagcttcttttgacagcaccaacaagaaagtttgaatgt
aatgagatccctgacctgtcaattcttgctaagtgtaatccgtgtttagctgagccgtgt
ttaaatgatggtgaatgtcacaatggtgaatatgctggatatatatgtaaatgtgccagt
gggttcaaaggtcagaactgtgaggaagagatcaatgaatgtgataatgaaccctgtaaa
aatggagctacatgctacaaacaaaaaaaagatttcagctgcgaatgtccaataggtttt
gttggtgatttctgtgaagataatataaatgattgtttattaaataattgtatgaataat
gccacatgtattgatgcagttaataactatacttgtcagtgttcacctggatttactggt
gttttctgtgaaactgatatcaatttctgtgagctattcatcaatccatgtaaaaatgga
ggtacatgtgttgaccttgttaatgaatacagatgtgactgtccagaaggatatgtagat
gtacattgtagctctaccaaccagaactgtaaagacgtcaaatgtcagaatggtggaacg
tgtgtggatgatgaaaaggaagactatacgtgtaaatgtccgtctggattcaacgggcca
cactgcgagtactcaccgagggtgttcagtcagcataccagtccatgtcagtaccaagac
tgtaaaaataacggacaatgttactacaataatgttacaggtaactatggttgcaactgt
ttacctggtttccatggtgataaatgtgagatgatcatcagcgtaaccttcacgcagaag
gattcttacgtacagtatcataaattggagaataaacctaaagccaatattacaatggta
tttgctacgagacaagaaaatggaattctgttttataatggattaatggatcacattgcg
gttgagttattctacggacgtgttcgtgtaagctacgatgtcggtaactaccctgtctcc
actatgttcagttatgaaaagatcaacgatggtaattttcactcgttggaaatattggcc
gtgaaacagaacataacaatgcgtgtcgacgatggcaatccaaatacagcaaccaataaa
ggggacaatgaatatttaaatgtggaaactccactttacatcggtggactgccggaagaa
gtaatcaaagggcctgctgttaggcttgtacatgtaaggaatggaactagttttaatggt
tgtatgaggactgttttattgaacggcgagtacctggattacaccaaaagtgaagagatg
caaggcatagccccaggatgtccaacttatgacaaacctgatccgtgtatcatgcatatg
tgtaaacaaggtttctgtcgagctctggacacgtatagctacgtgtgtgactgtttagat
gggtggatgggtgcaaaatgtgataatcctacaacctgtgttgggcagcattaccgtgaa
gttattgaagatgaggatggatgcaagagtaggcgtcttattgaaaacatgcgatgcgca
ggagaatgtggcaactcctgctgtcgaccgcagcgtgtgcgccgacggaaggttacgctc
cagtgtgaagatggaaccagtcggagcaagcaaattgatgtgacaaagacgtgtgcttgt
cagtggtgcggcgacttaacataa
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