Saccoglossus kowalevskii (acorn worm): 100329032
Help
Entry
100329032 CDS
T04123
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04137
Mitophagy - animal
sko04140
Autophagy - animal
sko04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100329032
04137 Mitophagy - animal
100329032
04148 Efferocytosis
100329032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sko03000
]
100329032
Transcription factors [BR:
sko03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100329032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HIF-1a_CTAD
PAS_9
PAS_4
HIF-1
Motif
Other DBs
NCBI-GeneID:
100329032
NCBI-ProteinID:
XP_002733787
UniProt:
A0ABM0GNE0
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MMDGYYLKALEGFIMVLTEEGDMAFLSENVAKYLGLTQVDLAGHSIYDYTHPCDHEEIRE
QLSDKPGLPLSSKKKKDNLSFLIRMKCTLTAKGRNVNLKSATYKVIQCCGHMKTTEAIQD
VSLMGYKTPATTCLVVVGEPIPHPANIEIPLDSQTFLSRHSMDMKFTFVDDRIHEITGYQ
VSDLIGKSAYDFCHALDTDKIEKSYHDLYAKGQTSTGQYRFLAKKGGYVWVQTQATVIYN
NRTSKPQCIVSVNYVLSSGVEKEDLVLSTEQQMKGLPKSKQXSISDMKLSTEKIFSPHTT
DKKANFWSCSGDNKLNMWTADAEDLLCVAPAAGDTMIPLPFPDDLSQMKNGVPSAMDMNI
YDDVLFPPDHSTPNFTGFDPFTCTPVTIGCFNSDKKQEQQSQLQKEPAKQTTVAAAPTTT
TDEATNKCVFSQYRGSASLASPLSISPDLTPKPSPSPGSPVDYKNTDQPVDSEMVDKVSL
LLSEPQNELDISTEELVMRAPYIPMVGEDFCLYNGKIMNDPVLSSAALPSPPHLPSFTGS
SSQRVIYSPVGRGTPSPSMPIGSTESVFSPLKTAYTAGQSNSQTRLSRPTLAPSLLTTIR
KRKLTPPSTISQPPMKATCSGGQSSLADQILFGMSSVKQEPKSLAQKALAGCLKLPEVNH
QRKTSLLNLLLNASNGSDNDSGESNTTTADTITSNGRKLIEANCTTSGSRMKIAPLLDVT
RYDAEVNAPLKSTQGLLQGEDLLRALDQTANRAPSPHSVW
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggttattatctgaaggcattggaaggatttataatggttctaactgaagaa
ggagatatggcatttctttcagaaaatgttgcgaaatatttgggccttacacaggttgac
ttggctggccacagtatctatgattacacccatccatgtgatcatgaagaaatccgagaa
cagctgtcagataaaccaggactacctctatcctctaagaagaagaaagacaatctctct
ttcctcattcgcatgaaatgtacactaacagcaaaagggagaaacgttaatttgaagtcg
gctacatacaaggtaatacagtgttgtggtcatatgaagacgacagaagccatacaggat
gtcagtttaatgggatataaaactccagccacaacgtgccttgtggtggtgggtgaacca
ataccccacccagctaatatagaaataccattggacagtcagactttcttatcaaggcat
tcaatggacatgaaatttacttttgtggatgacagaattcatgaaataactggatatcaa
gttagtgacttgattggtaaatctgcatatgatttctgtcatgccctagacaccgacaaa
atagagaaaagttaccacgacttgtatgccaagggacagacatccacaggacaatataga
ttcctggccaagaagggcggatatgtatgggtacagacacaagccacagtaatatataac
aatagaacatccaaaccacagtgtatagttagtgtgaattacgtgctaagcagtggcgtt
gaaaaagaagatttagttttgtccactgaacagcagatgaaagggttgcccaagtccaag
ccttcaatatctgacatgaaattgagtacagagaagatattctctccacataccactgac
aagaaagctaatttctggagctgttcgggtgataacaaactaaatatgtggaccgctgat
gcggaggacctgctgtgtgttgcgcctgctgccggtgacaccatgattccattaccgttc
cctgatgatttatctcaaatgaaaaatggggtaccaagtgccatggatatgaatatttac
gacgatgttttatttccgccagatcattcaacgccaaatttcactgggtttgatccattt
acatgtacccctgtcacaatagggtgcttcaatagtgataagaagcaggaacagcagtct
caactacagaaagaacctgcaaaacaaacaacagtggcggcggcgccaaccacaacaaca
gatgaagccacaaacaaatgtgttttcagtcagtatcgtggtagtgcatcattggcgtct
ccactcagtataagtccagatttgactccaaagccaagcccgagtcctggaagtccagtt
gattacaagaacacagaccaaccagttgactctgaaatggttgataaagtttcgttgtta
ttgtctgaaccacaaaatgagctagatatatccacagaagaactcgtaatgcgagctcca
tatattccaatggttggtgaagatttctgtttgtacaatggtaaaataatgaacgaccct
gtattaagcagtgcagcgttaccgtcgccaccccatctaccgtcatttacagggtcatcg
tcccagagagttatttatagcccggttggaagaggaacaccaagtccatcaatgccaatt
ggaagtacagagtctgttttcagtcctttaaaaacagcgtatacagctgggcagtcgaat
agtcagacgaggctctctcgacccacacttgcaccaagtttgttaactactatacgaaaa
aggaaactgaccccaccctcaactatttcccaaccacctatgaaagcaacttgcagtggt
ggtcagagctccttggcagaccagattctctttggtatgagctcagttaaacaggaacca
aaatctcttgctcagaaagctttagcaggatgtctaaagctgccggaagtgaatcatcaa
cgcaagacttcattactgaatctgttgttgaatgcttccaatgggagtgacaatgacagc
ggtgagagtaataccactactgcagacacaataacatccaatggaagaaagttgatagaa
gcaaattgcaccacaagtggtagtcgtatgaaaatagcaccgctactagacgtgactcgc
tacgatgccgaagtgaatgcccccttgaaatcgactcaaggtttattacaaggtgaagac
ttgctacgggctctcgaccaaactgctaatagggcaccttccccacacagtgtgtggtga
DBGET
integrated database retrieval system
