Saccoglossus kowalevskii (acorn worm): 100329050
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Entry
100329050 CDS
T04123
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-2
KO
K04986
polycystin 2
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sko03037
]
100329050
04040 Ion channels [BR:
sko04040
]
100329050
Cilium and associated proteins [BR:
sko03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100329050
Ion channels [BR:
sko04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100329050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Ion_trans
YVC1_C
EF-hand_1
EF-hand_7
EF-hand_6
DUF6693
Motif
Other DBs
NCBI-GeneID:
100329050
NCBI-ProteinID:
XP_002737271
UniProt:
A0ABM0GTX1
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSQTRVSPTNRPTSAAGLSIHDEMEMDRIVQEELGRRSTNRPSSAQSRHAWHENEGMDMD
DGPLDNYGNDMYPDDDDHAPTAMENEVYVDGTMRVMDAQTKAKLEEPRTGCMNKFKRGIR
SIWKTRQTEDTKTDRELHVKTTLRELIIYILFIIVLCIVTFGMTSSTMYYYTKVMSELFL
DTQFPDTKNTFRGMTNALDWWRFAEGPLVNGLYWEQWYNGENLTEEELGFIYYENKLLGV
PRIRELKVRNNSCEVHSDFEDEIKYCYDEYSESVEERTPFGKMNGTAWEYSTEEELDGSS
HWGQLATYGGGGYYLDLNHDKASSLEEILELKEYLWLDRGTRVVFIDFTVYNANINLFCV
IRLVTEFPATGGAIPSWDFRTVRLLRYVDTFDYFIMACEGIFCLFIAYYIVEEILEIKMN
RWSYFKSVWNCLDLLVIGLSLVCIAFSVYRTMEVAEMLNSLLVNPEVYADFEYLSYWQSM
YNNMLAVLVFFAWIKVDNLFYAKFDIFTGFTLFRIILGDFDFHELEQANRIMGPIFFCTY
VFFVFFVLLNMFLAIINDTYSEVKADIATQKSEFEITDYFKRGYDKMLGKLNFKRDKIVD
IQKALAQADINNDQQLDYDEWRHELKARGHADAEIEAVFAKYDVDGDRVLDSDEQARMAA
DLQEQKVLLSRRVDRMEHSIGSIVSKIDAVXVKLEAMERAKLKRXETMGKLLDSITEDER
QGRSEDDGKRDQMERLVREELERWDSEASITQASGRAQSANSKAGSGKTSPAQEALLQIT
ISHWTRETCQPAMYNCNQNITFYLSLIHPFYL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacgcgcgttagcccaactaatcgtccgaccagtgcagctgggctgtcaatt
cacgacgagatggaaatggaccgcattgtgcaagaagaactgggcagacgatcgaccaat
cggcctagtagtgcccaatctaggcacgcttggcatgaaaatgaaggcatggatatggat
gacgggcctctggacaactatggaaatgacatgtaccctgacgatgatgaccatgcccca
accgccatggagaacgaagtttacgttgatggaactatgagggtcatggatgcacagaca
aaagcgaaattggaagagccgcgaactggctgcatgaataaattcaaacgtggaataaga
tcaatatggaaaacaagacaaactgaagacactaaaactgacagagagttgcatgtgaaa
actactttgagggaacttatcatctatatcctgtttattatagttctctgcattgtgacc
tttggaatgaccagttcaacaatgtactattacactaaagtcatgtctgagctgttcctg
gacactcagttcccggatacgaagaacacattccgtggcatgacaaatgcattggattgg
tggaggtttgcagagggtccattggtcaatggcttgtattgggaacaatggtacaacggt
gaaaacttgactgaggaggaattgggatttatatactatgaaaacaaattacttggagta
ccacgtatcagagagctgaaagtgcggaataactcgtgtgaagttcactctgattttgaa
gatgaaatcaagtattgctatgatgagtattcagagagtgttgaagagagaaccccattt
gggaaaatgaatggcacagcatgggagtattcaactgaggaggagctagatggctctagt
cactgggggcagttggccacttacggtggaggtgggtattatctggatctcaaccatgat
aaagcatcatcgctggaagagattttagaactaaaggagtatctatggttggatcgagga
actcgggtagtgtttatagacttcactgtttataatgctaatatcaatctgttctgtgtt
atcaggttggtgactgagtttcctgccactggtggcgctatcccgtcgtgggatttccgt
acagtcagattgttgcgttatgtggatacttttgactactttatcatggcctgtgagggc
atattctgccttttcattgcctactacattgtggaagagatcttagaaattaagatgaac
aggtggtcttactttaagagtgtatggaactgtcttgatttgctggtcattgggctgtca
cttgtctgcattgccttcagtgtgtatcgtacgatggaagttgctgaaatgttaaattca
ctgctagtcaatccagaagtctatgctgattttgaatatctcagctattggcagtcgatg
tacaacaacatgctggcagtgttagttttctttgcttggattaaggtggataatctgttc
tatgccaaatttgacatattcactggtttcaccctgttccgtattatcctgggagacttt
gatttccatgaattggaacaagctaaccgtatcatgggtcccatctttttctgtacctat
gtgttctttgtattctttgtactgctgaacatgttcttggctatcatcaatgacacctat
agtgaggtgaaagcagatattgctacccagaagagtgaatttgagattactgactacttc
aagaggggttatgataaaatgcttgggaagctgaacttcaagcgtgacaagattgttgac
attcagaaagcacttgcccaagctgatatcaacaatgatcagcaactagattacgatgag
tggagacatgaacttaaagctcgtggtcatgccgatgctgaaatcgaggctgttttcgcc
aagtatgatgttgacggtgatcgtgtattggattctgatgaacaagctagaatggcagct
gacttgcaagagcaaaaggtactactgagtcgcagagttgatcgtatggagcattctatt
ggaagcattgtctccaaaattgatgctgctgtgaaattggaagcgatggaaagagcaaaa
ttgaaaccggagaccatgggcaaattgttggatagtattaccgaggatgaacgtcagggc
cgcagtgaggatgatggcaaacgtgatcagatggaacgtctagtacgtgaagaactagag
cgctgggattctgaggcttcaatcacacaggccagtgggcgagctcagagtgccaatagc
aaggctggcagtggaaagaccagtcccgcccaggaagcactgcttcaaatcacaatatct
cactggacccgggaaacatgtcaaccagcaatgtataactgcaatcagaatatcacattc
tacttatcattaatccatccattttatctatga
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integrated database retrieval system
