KEGG   Saccoglossus kowalevskii (acorn worm): 100329075
Entry
100329075         CDS       T04123                                 
Name
(RefSeq) beta-TCRP E3 ligase
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120  Ubiquitin mediated proteolysis
sko04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100329075
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100329075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sko04121]
    100329075
   03036 Chromosome and associated proteins [BR:sko03036]
    100329075
Ubiquitin system [BR:sko04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     100329075
Chromosome and associated proteins [BR:sko03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100329075
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd EIF3I DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-TrCP_D WD40_Gbeta Beta-prop_EML WDR55 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th CFAP251_N NBCH_WD40 WD40_like F-box Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_DCAF12 PAC11 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N F-box_5 WD40_RFWD3 Beta-prop_WDR11_2nd eIF2A KNTC1_N Frtz
Other DBs
NCBI-GeneID: 100329075
NCBI-ProteinID: NP_001164686
UniProt: D2XMQ7
LinkDB
Position
Unknown
AA seq 509 aa
MMSLTTITDENIPEGMTTQTTIKSIRSNKEPSPNYEKERENCVRYFDQWKENEQIEFVEQ
LISRMCHYQHGHINSFLKPMLQRDFITALPKKGLDHVAENILSYLDAKSLCAAELVCKEW
YRVIQDGMLWKKLIERMVRTDPLWKGLSERRGWSQYLFRPKPGEIQPTNDFFRSQYPRII
EDIEAIETNWRCGRHTLQRIHCRSENSKGVYCLQYDDQKIVSGLRDNTIKIWDRNSLDCV
QVLTGHTGSVLCLQYDENVIITGSSDSTVRVWNVHNAEMVNTLIHHCEAVLHLRFNDGMM
VTCSKDRSIAVWDMQSSTDINLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC
EFVRTLNGHRRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN
KRIVSGAYDGKIKVWDLQAALDPRAPAGTLCLRTLVQEHSGRVFRLQFDEFQIVSSSHDD
TILIWNFLNAPHLEGGTTRSSRTYTYVSK
NT seq 196 nt   +upstreamnt  +downstreamnt
taggttatgggatattgaatgtggggcttgtttacgagtgttagaaggccatgaagaatt
agtaagatgtattcgttttgataacaagagaattgtcagtggtgcatatgacggaaaaat
aaaagtgtgggatttacaggctgcccttgatccgagagcaccagcggggactctgtgcct
gagaacattggtgtaa

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