Saccoglossus kowalevskii (acorn worm): 100329075
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Entry
100329075 CDS
T04123
Name
(RefSeq) beta-TCRP E3 ligase
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
sko04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100329075
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100329075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100329075
03036 Chromosome and associated proteins [BR:
sko03036
]
100329075
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100329075
Chromosome and associated proteins [BR:
sko03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100329075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-TrCP_D
WD40_Gbeta
Beta-prop_EML
WDR55
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
CFAP251_N
NBCH_WD40
WD40_like
F-box
Beta-prop_HPS5
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
PAC11
Beta-prop_IP5PC_F
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
F-box_5
WD40_RFWD3
Beta-prop_WDR11_2nd
eIF2A
KNTC1_N
Frtz
Motif
Other DBs
NCBI-GeneID:
100329075
NCBI-ProteinID:
NP_001164686
UniProt:
D2XMQ7
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MMSLTTITDENIPEGMTTQTTIKSIRSNKEPSPNYEKERENCVRYFDQWKENEQIEFVEQ
LISRMCHYQHGHINSFLKPMLQRDFITALPKKGLDHVAENILSYLDAKSLCAAELVCKEW
YRVIQDGMLWKKLIERMVRTDPLWKGLSERRGWSQYLFRPKPGEIQPTNDFFRSQYPRII
EDIEAIETNWRCGRHTLQRIHCRSENSKGVYCLQYDDQKIVSGLRDNTIKIWDRNSLDCV
QVLTGHTGSVLCLQYDENVIITGSSDSTVRVWNVHNAEMVNTLIHHCEAVLHLRFNDGMM
VTCSKDRSIAVWDMQSSTDINLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTC
EFVRTLNGHRRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN
KRIVSGAYDGKIKVWDLQAALDPRAPAGTLCLRTLVQEHSGRVFRLQFDEFQIVSSSHDD
TILIWNFLNAPHLEGGTTRSSRTYTYVSK
NT seq
196 nt
NT seq
+upstream
nt +downstream
nt
taggttatgggatattgaatgtggggcttgtttacgagtgttagaaggccatgaagaatt
agtaagatgtattcgttttgataacaagagaattgtcagtggtgcatatgacggaaaaat
aaaagtgtgggatttacaggctgcccttgatccgagagcaccagcggggactctgtgcct
gagaacattggtgtaa
DBGET
integrated database retrieval system