Saccoglossus kowalevskii (acorn worm): 100366795
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Entry
100366795 CDS
T04123
Symbol
VARS
Name
(RefSeq) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100366795 (VARS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sko01007
]
100366795 (VARS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sko03016
]
100366795 (VARS)
Enzymes [BR:
sko01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100366795 (VARS)
Amino acid related enzymes [BR:
sko01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100366795 (VARS)
Transfer RNA biogenesis [BR:
sko03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100366795 (VARS)
Prokaryotic type
100366795 (VARS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
Kelch_HCF
tRNA-synt_1e
AAA_23
Motif
Other DBs
NCBI-GeneID:
100366795
NCBI-ProteinID:
XP_002732116
UniProt:
A0ABM0GKU1
LinkDB
All DBs
Position
Un
AA seq
1103 aa
AA seq
DB search
MFHGIARYICINSVRLHTSRQTDLHILSTEIYRKSRILCSSFSGKMEVTESPAGGGDQAA
AGDQPPKTAAQLKKEAKKQAKLDKFKQKQEKQAKMQGNQNTEKKKEKKEKKVKEVISYEF
DTPQGDKKNISCVMPDSYSPKYVEAAWYSWWEKMQFFKPEYGHGPLKEEIARGKNVFMIC
IPPPNVTGSLHLGHALTSSVQDALVRWHRMKGEITLWNPGCDHAGIATQVVVEKKLFREK
QLTRHDLGRDKFVDEVWKWKNEKGDRIYDQLKAMGSSYDWDRTCFTMDDKLSRAVKESFV
RLHEEGVIYRSNRLVNWSCRLNSAISDIEVNKHELTGRTLLPVPGYDDKIEFGVLVSFAY
KVHDSDEEIVVATTRVETMLGDTAVAVHPNDERYKHLHGKSVVHPFRNETMPIICDDYVD
MEFGTGAVKITPAHDHNDYDIGKRHDLVFLTMIDDNGNITDVGGQFAGMKRFSARKSVLE
ALKEKGLYRDTKDNPMVVPICSRSKDIVEPLIKPQWYVDCNDMAKKAVEAVENGDLKIIP
DIHIKTWNSWLKNIRDWCISRQLWWGHRIPAYFVTVDDPNVPTGDDIDGNYWVSGRDENE
ARKKAAAKFNVTEDKISLRQDEDVLDTWYSSALFPFSIFGWPDTTDDLEVFYPGTLLETG
HDILFFWVARMVMFGQKLCGKLPFREVYLHAMVRDAHGRKMSKSLGNVIDPLDVIHGISL
EGLHQLLHDSNLDVKEIQKAKDGQKADYPEGIPECGTDALRFALCAYTSQGRDINLDVLR
VQGYRHFCNKLWNVTKFALMSLGEDYKPSSQIQLTGDESLVDKWMLSRLSFAVSACETGF
PEYDFPLITSSIYNLWLYEMCDVYVEYMKPILQGSNESAKVSVRNILYTCLDTGLKLLSP
FMPFVTEELWQRLPRRSGDEPPSICVSNYPEIKNFGFRNEQLEQDFEFVQNVIKQIRVIR
AEYQLTKQKPEVYLRCSTTSVSEMLQPYNFVIQTLGSVSTIHHIPADGGDIPSGCAISTV
SDKCEVHLLLKGMIDVSKEINKLKQKQERLAGQQKKLQNAMSIDDYDNKVPENIRQNNSE
KLSQTENEIQKITEAISMLKAAE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatggtattgcacgatatatttgtataaattctgtgcggttacatacttcaaga
caaacagatcttcacattttgtcgacagaaatatatcggaaatcgagaattctttgtagt
tcatttagtggcaaaatggaagtgaccgagtctccagctggagggggtgaccaggcggcg
gccggcgaccagccaccgaaaactgctgcccagctgaagaaggaagcgaaaaagcaagcg
aaacttgacaaattcaagcagaaacaggaaaaacaagccaagatgcaaggcaaccaaaat
acagagaaaaaaaaagagaagaaagagaagaaggtaaaagaagtgatatcatatgaattt
gatactccacaaggtgacaaaaaaaatatatcctgtgtaatgcctgattcctatagtccc
aagtatgtagaggctgcatggtactcatggtgggagaaaatgcagttctttaagccagaa
tatggtcatggtccattgaaggaggaaattgcccgggggaaaaatgtgtttatgatctgc
atcccaccaccaaatgttactggttcattacatcttggacatgcactgacatcatctgtg
caagatgcactagtgagatggcataggatgaagggtgagataacactttggaatcctgga
tgtgatcacgcaggtatagctacgcaagttgttgttgagaagaaactgttcagggaaaaa
caattaacaaggcatgacttgggacgagacaaatttgttgatgaagtctggaagtggaaa
aatgagaaaggcgacagaatctatgaccagctaaaggcaatgggttcatcatatgactgg
gaccgtacatgctttaccatggatgataaattatctcgagccgtcaaggagtcatttgtt
cgtcttcacgaggaaggtgttatttatcgtagtaatagactggtaaactggtcctgccga
ctaaactctgctatctcagatattgaggtgaataaacacgaactaacaggacgtaccttg
ttacctgtaccaggatacgatgacaaaatagaatttggtgtcctagtctcatttgcatat
aaagtgcatgactcagatgaagaaattgttgtcgcgacaacacgtgttgagacgatgtta
ggtgatacagctgtagccgtccatccaaacgatgaaagatacaaacatttacacggaaaa
agtgtagttcatcccttccgtaatgaaaccatgccgattatctgtgatgactatgtggat
atggaatttggtacaggtgctgtaaagataactccagctcacgatcacaatgattacgat
attggtaaacgtcatgatttggtattcttgaccatgattgatgacaacgggaatattact
gatgttggcggacagtttgctggtatgaagaggtttagtgcacgcaagtctgtattggaa
gcgttgaaagagaaaggactatacagagatacaaaagacaacccaatggtagttcctata
tgcagtcgttctaaagacattgtagagccgttaattaaaccacagtggtatgttgactgt
aatgatatggccaagaaagccgtagaagctgttgaaaatggagatttaaaaattattcca
gatattcacatcaagacttggaattcatggctgaaaaacatcagagattggtgcatttcg
cgtcagttgtggtggggtcatcgtatcccagcatactttgtgactgttgacgatcctaat
gttccaactggtgatgatattgatggtaattactgggtcagtggcagagatgagaatgaa
gccagaaagaaagcggctgccaaattcaatgtcactgaagataaaatttctctaagacaa
gatgaagacgttttagatacatggtattcgtctgctctttttccattctctatatttgga
tggccagatacgactgatgatcttgaagtgttttatcccggtactctattggaaactggt
catgatatcttgtttttctgggtagccagaatggtaatgtttggtcagaaactatgcggg
aaacttccgttccgcgaggtttatttacatgcgatggtacgtgatgcacatggccgaaag
atgagtaaatctttaggtaatgttatagatccacttgacgtcatccacggtatttctctt
gagggtctacatcagttattgcatgatagtaatttagatgtaaaagaaatccagaaagcc
aaagacggtcagaaagctgattacccagaaggtatacctgaatgcggtacagatgcgtta
agatttgcactatgtgcttatacatcacaaggtagagatatcaatttggatgttctacgt
gttcaaggctatcgccatttctgtaataaactatggaatgttacaaagtttgctttgatg
tcattaggggaggattataaaccatcatcacaaatacagttgactggagatgaaagctta
gttgataaatggatgttgagtcgattatcatttgcagtatcagcttgtgaaactggattc
ccagagtatgacttcccactcatcacatcgtcaatatacaacctatggttatatgagatg
tgtgatgtttacgtggaatacatgaaacctattctacaagggagtaatgaatcagccaaa
gtcagcgtcaggaacatactgtatacatgtctagatactggtctaaaacttctgagtcca
ttcatgccatttgttacagaggaactttggcaacggttaccaagacgaagtggcgatgag
cctccaagtatttgtgtcagtaattaccctgaaatcaaaaattttggtttccgaaatgag
caactagagcaggattttgaatttgtacagaatgtcataaaacagatacgtgtgatcaga
gccgaatatcaactcacaaaacaaaaacctgaagtgtatctacgatgtagtacaacatct
gtttctgagatgttacagccttacaattttgttattcaaacactgggtagtgtatctacg
atacatcatataccagccgacggtggtgatataccgtcagggtgtgctatatctaccgta
tctgataaatgtgaagtccatctactacttaagggtatgatagatgttagtaaagaaatt
aacaagttgaagcagaagcaagaaagacttgctggacagcagaagaaattacagaatgca
atgagtattgacgactatgataataaagtaccagaaaatattcgccaaaataattcagaa
aagctttcacagactgagaatgaaatacagaagataacagaagccatttcaatgttaaaa
gcagcagaatag
DBGET
integrated database retrieval system
