KEGG   Saccoglossus kowalevskii (acorn worm): 100367259
Entry
100367259         CDS       T04123                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03030  DNA replication
sko03410  Base excision repair
sko03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100367259
   03410 Base excision repair
    100367259
   03420 Nucleotide excision repair
    100367259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sko03032]
    100367259
   03400 DNA repair and recombination proteins [BR:sko03400]
    100367259
Enzymes [BR:sko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100367259
DNA replication proteins [BR:sko03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100367259
DNA repair and recombination proteins [BR:sko03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100367259
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 NXPE4_C zf_DPOE_2 Neurexophilin zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N BSP_II DUF1664 CENP-B_dimeris
Other DBs
NCBI-GeneID: 100367259
NCBI-ProteinID: XP_006814989
UniProt: A0ABM0M4P8
LinkDB
Position
Un
AA seq 2630 aa
MRKCLPKVIKFDRTASTNLTKWCYRTVVDTRVIEMIRQEREVHRSISKSEDSSEARLQRS
LANDEMDSRFGFDRYKEPIEKLGWLINMHPVSLPYKPYFYVATKKNTEREVSAFLTRKYQ
GVLSTLETMPKEDLDLHNHLVGLKRNYLKLSFLTVSDLNKVKRDLMPVVRKNKEREKSSD
SYTSLLTSQLSGQAETSSTASKKLSDQLDNIIDIREYDVPYHVRVAIDGKIHVGHWYSVK
GRGTLPPEINQRDDLLDRPDPVVMAFDIETTKLPLKFPDMETDSIMMISYMIDAQGYLIT
NREVVAEDVNDFEYTPKPEYEGPFIVFNEVDEVSLLQRFIEHVLEVKPHIFVTYNGDMFD
WPFVEARCNYHGIDMYKEIGFQKDTQGEYKSRQCIHMDAYRWVKRDSYLPVGSQNLKAAS
KAKLRYDPIELDPEEMCRMASEEPQVLANYSVSDAVATYYLYMKYVHPFIFALCTIIPME
PDEVLRKGSGTLCEALLMVQAFHANIIFPNKQETIWNKLTSDGHVLDSETYVGGHVEALE
SGVFRADLPCRFRMVPEAFQQLIDNVDRTMKQAIEIEEKVSIDKVTNFQEVCDDIKEKLS
ALRDTPARLENPIIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGARCQRNMT
WTWRGEFMPASRSEFNRIQQQLETERIPGLNPGDPPRVFHEIHKEEQAFIEKKRLAEYCR
KAYKKVHITRIEERQTTVCQRENSFYVDTVRAFRDRRYEFKGQLKVWKRKLAAAIDKGEA
NEIKSCKSKEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTGADIITKARE
IVEQIGRPLELDTDGIWCVLPASFPENYVIKTTDAKKSKVTISYPGAMLNIMVKDIFTND
QYQELVDPSHLTYIARSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAEL
KGFEVKRNGELQLIKIFQSSVFEAFLKGTVLEECYGAVAKVADYWLDVLYSKAANMPDTE
LFELISENRSMSRKLEDYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCKFIIAKKPEGAP
VTERAIPLAIFQAEPGVKRHYLKKWLKMPAATDFDIRNILDWEYYIERLGSAIQKIITIP
AALQQVSNPVPRVAHPDWLHKKLLEKNDIFKQQRINEMFAPRQKKKEEMVTEDCGIGDIE
DSGTVRQTTQNTIVASVSRKRRLSTDDSQLTQSWRDVLGPAPPLGKSREEKQVWLAYHKK
KWQLQAKQRQNRKRRRIDYGDDTGGGAIRSGPNTGIGGFLRKTARSILDMPWQIVQIATT
NNIGVFKAWALIGHDLHAIKLNVPRRFYVNQRTPKESTEGALWRKVNRTLPRSALVLNLY
EYSVPEFLYRQHANELNADLSSPDVDGVYETNVPPDFRCLVQLGCIATVNRHHARMFTGK
DSDTFDLDHLEFKTMAQYSYLNPGSVKRIYFYQNVSNNKMMLGLFFPTSKKVSVFVVDTV
RTNQMPNLSAMYQAERNAMVTRGDIDEDFLPPSDHTFEIRVEKDVRQVYRAINHLLISYK
DEKRGATYIAIQSSYDNADIVSKMSSFDDFPLVRVHVTDPESLYSVLDWQRQGSRRLIQH
YMNVDYIVAEIYKAIYCLCLCRLVMEFEESSVEVNNPGCYPSVCVELDIASLAVNTLLQS
HHINEMEGGAGNIAFDVIPQTSLEDMVTGGTNAAAQLASYDETALCSVALKILKSMVHGW
LRDVTTYKNVFADYQIMQFYRWLRSPSALLYDPALRRTMHSLMQKLFLQLVAEFKRLGST
IVYANFNRIIICTKKRRIVDAIAYVEYITNSIKSRELFHSVDISFQQCWEHLVWLDPANY
GAIKGKLPKSVGDDDVKPNDEEENDELELKLNEDEEEEEDEYEVEMNWNIMHYLPQAGAC
QTNFNMIIAGYILAVYQHSKEEQQHHTPGNTPIRKRGNTQTQKSSDTTATPSTVNFAQDL
VAGELSQQLFGITLKIQKKVSGNRSNHGNAADEFPQLPGSHLPLNNPALEFIKAICKVLS
LDTNITIQVAKLNRDLLKLISVGEFSEDSNWRDPCLSYVLPEVICKTCNHCRDLDLCRDP
LLLQDENTAAVWQCVQCKSDYDVNEIERLLIEAVQRLSMAYVLQDVTCSKCNMIKALNMS
AHCECAGDFDVTMAISKFAEKMKVFRNIAMVSLFNNKSNIYKGKFVHVRIETFDDNGRER
NRGGDFFSAVMSNEDFQKSTAGRIVDYANGTYSVFFYAAWSGNANITVALTFTREAINFL
RHVIKSKEEMTKFTGRYRDGTSQNISQCTLINEGIWQNKCEYINRNSLGKTTLICNKPTN
VGCEKLEYIKASVESLNKVTAEKIKDFEYLYKKRYHLSQLHATPLMINIKENSSTLEPMV
PCGPDLPVPLSDGYWENHKVFVPLVCSSTQWSDDDVRKCLSNTVVLESGDSNLRQFKWFF
AKFYDIKFQHYFVSPRTGNVVDHFWSSVLESDLLDHIETDTCHSRKHIVILNFSFHFGLW
SMRSYVERIFHAKLAVERLLNRCPNVNVVIKLSHPRDNMYTEQNVHSSNWVFYDQNRVIR
YVFAGIGVIFLDVWDMVVSSVERNTVHMPQHVIRQQVYLLLSYICPEMVN
NT seq 7893 nt   +upstreamnt  +downstreamnt
atgcggaagtgcttgccaaaagtgatcaaatttgatagaactgcatcgaccaacttgaca
aaatggtgctacagaacagtggtagatacaagagtgatcgaaatgatccgtcaggaaagg
gaggtacatcgaagtataagtaaatcagaagattcttctgaggctcgtttacagcgttca
ttggcgaatgatgagatggacagtcggtttggatttgatagatataaagaaccaatagag
aaattaggatggctgataaatatgcatccagtctctctaccctataagccatatttctat
gttgcaactaagaaaaatactgaaagagaagtgtctgcattcttgacacgtaaatatcaa
ggtgtcttgtctactcttgaaacaatgccaaaagaagatctagatttgcataatcattta
gttggtttgaaaaggaattacctgaagttgtcatttttaactgtctctgatctgaataaa
gtaaaacgtgatttgatgccagttgttcggaagaacaaggaaagagaaaagtcttcagat
agctatacatctttgctaaccagtcagttgtctggtcaagcggaaacctctagcacagcg
tctaagaagttatcagatcagctggacaacataatagatataagagaatatgatgtgcca
taccatgtcagagtagccatagatggtaaaatacatgtgggacattggtatagcgttaaa
ggaaggggaactctgccaccagaaattaaccagagagatgacttattagacaggcctgat
cctgttgtcatggcatttgatattgagacaacaaagttaccattgaaatttcccgacatg
gaaactgattctattatgatgatatcatatatgatagatgcacagggttatctaattacc
aacagagaagtagtggctgaggatgttaatgattttgaatatactcctaaaccagaatat
gaaggaccatttattgtatttaatgaagttgatgaagtgtctttattacagaggttcata
gaacacgttttagaagtgaaaccacatatttttgtaacatacaacggagatatgtttgat
tggccatttgtagaagcccgttgtaattatcatggtattgatatgtataaagaaatagga
tttcagaaagatacccagggtgaatataaatcacgacagtgtatccacatggatgcatat
cgatgggtcaaaagagacagttatctgccagttggaagtcagaatctgaaagctgcatca
aaagccaaattacgttatgatccaatagagcttgatccagaagaaatgtgtcgcatggcg
agtgaagaacctcaagttttagcaaactattcagtgtctgatgctgtggctacttactat
ttatacatgaaatatgtacatccattcatatttgctctttgtactatcattccaatggaa
ccagatgaggttctcaggaagggatccggcactttgtgtgaagctttattaatggtgcaa
gcgttccatgcaaatattatttttccaaataaacaagaaaccatatggaataagctgaca
agtgatggacatgtgttagattctgagacttatgtgggtggacatgtggaagcattagag
tctggtgtcttcagagctgatctaccatgcagatttcgaatggtacctgaagcatttcaa
cagctgattgacaatgttgaccgaacgatgaaacaagcaattgagatagaagagaaggtg
tcaatagacaaagtaaccaatttccaagaggtttgtgatgatatcaaagagaaattatca
gcattacgagacactcctgctagattggaaaatcctataatttatcatttagatgttggt
gccatgtatcctaatattatactgacaaataggctgcagccatctgcaatggtagatgaa
gccacatgtgctgcgtgtgatttcaataagcctggtgctcgttgtcagcgaaatatgacc
tggacatggcgtggagagtttatgccagcctcacgtagtgaattcaatcgcattcaacaa
caattagaaactgagaggataccaggattgaaccctggagatccaccacgagtatttcat
gaaatacacaaagaagaacaggcttttattgaaaaaaaacgacttgcagagtattgtcgc
aaagcatacaaaaaagtacatatcaccagaattgaagaacgccaaacaactgtatgtcaa
cgagagaattcgttctatgttgacacagtacgtgcattccgtgatcgcagatacgaattt
aaaggtcaacttaaggtatggaaacgcaagttagcagcagccattgataaaggagaagca
aatgaaatcaaaagctgtaaaagtaaagaagtcctctatgattccctgcagttggcacat
aaatgtattcttaattcattctatggatatgtaatgcgaaagggtgctcgttggtattca
atggaaatggcaggaattgtgtgtcatacaggtgctgatattataactaaagctagagaa
atagttgaacagattgggcgtccattggaattggatactgatggaatttggtgtgtttta
ccagcaagttttcctgagaattatgtcattaaaacaacagatgccaagaagtccaaggtc
actatatcataccctggagctatgttgaacattatggttaaggatattttcactaatgat
caatatcaggagttggtagatccaagtcatttaacgtatatagctagaagtgagaactct
atcttttttgaagtagatggtccatatcttgcaatgattttaccagcatctaaagaagaa
ggcaagaaattgaagaagagatatgctgtgttcaactttgatggttctttggctgaattg
aaaggttttgaagtaaaacgtaacggagaacttcaactaatcaagatatttcagtcatcc
gtgtttgaagcttttcttaaaggcacagtgctggaagagtgctatggtgctgtggctaaa
gtggctgattactggctggatgtgttgtacagtaaagctgcaaatatgccagatactgag
ctgtttgaactaatatcagaaaacagaagtatgtcaagaaagttagaagattatggatca
cagaaatctacttctattagtactgctaaaagattggctgagtttttaggagatcaaatg
gtgaaagacaaaggcttgtcttgcaagtttataattgcaaaaaaacctgaaggggcacct
gtgacagaaagagcaattccactggcaatctttcaagctgaacccggtgttaaaagacac
tacttaaagaaatggttaaaaatgcctgcagcaaccgactttgatatcagaaatatatta
gactgggaatactacatagaacgacttgggagtgctatacaaaaaattatcactattcca
gctgccctccaacaggtgtcaaaccctgtacctagagtagctcatcctgactggctgcat
aaaaagttactggaaaaaaatgatatctttaagcagcagagaattaatgaaatgtttgct
ccaagacagaaaaaaaaggaagagatggttaccgaggattgtgggataggtgatattgaa
gatagtggaactgtacgacaaaccacacaaaatacaattgttgcatctgtgtcaaggaaa
agacgcctatcaacggatgactcgcagttaacacaatcatggagggatgtacttggtcca
gctccaccacttggaaaatcaagggaagaaaagcaagtctggttagcttaccataaaaag
aagtggcagttacaagctaagcaaagacagaatagaaagagacgaaggattgattatggt
gatgacactggaggcggtgctataaggagtggtccaaatacaggcattggtggattcctt
cgtaaaacagcgagatctattttagatatgccatggcagattgtgcaaattgcaacaacc
aataatattggtgttttcaaagcatgggctttgattggtcatgatctgcatgctataaag
ctgaacgtaccaagaagattttacgtcaatcaaagaacacccaaggaatctactgaaggg
gcattatggagaaaagttaataggactttaccacgttcagccttagtgttgaatctatac
gagtacagtgttccagagtttctctacagacagcatgccaatgaattgaatgctgattta
tcttcaccagatgtggatggagtttatgaaactaatgtacccccagatttccgctgttta
gttcaacttggatgcattgcaactgtgaatagacatcatgcccgaatgttcactggaaag
gattcagacacgtttgacttggatcatcttgagtttaagactatggcgcagtattcttac
ttaaacccaggaagtgtcaaaagaatatacttctatcaaaatgtctctaacaacaagatg
atgttaggactgttcttcccaaccagtaagaaagtgagtgtatttgtcgtagatactgtg
agaaccaatcaaatgccaaacttatcagctatgtaccaagcagaaagaaatgccatggtg
actagaggtgatattgatgaggatttccttcctccgtctgatcatacatttgaaatccga
gtagagaaagatgtcagacaagtttacagagcaataaaccatttactgatctcgtacaag
gatgaaaaaagaggagctacgtacattgctattcagtcatcgtatgataatgctgatatc
gtgagtaagatgtcatcttttgatgattttcccctggtgcgtgttcatgttactgaccct
gaatcactgtatagtgtgcttgactggcagagacaaggatcacgaagacttatacagcat
tatatgaatgttgattacatcgtagctgaaatatataaagctatatattgtctgtgtctg
tgtagacttgttatggagtttgaagaaagcagtgttgaagttaacaatccaggctgctat
ccttctgtatgtgtagaattggatattgctagtttagctgtgaatacattattacagtct
catcatatcaatgaaatggaaggtggtgctggaaatattgcttttgatgtcattcctcaa
acgtctttagaagacatggtaactggtggcaccaatgcagcagctcagttagccagttat
gacgaaactgcactgtgttcagtggcattaaaaatattgaaaagtatggtgcatggatgg
ttgagagatgttacaacgtacaagaatgtttttgccgattatcaaattatgcagttctat
aggtggttgcgatcccctagtgcattattatatgaccctgctcttcgaagaactatgcat
agcttgatgcagaagttattcctacagttagtggcagaattcaagcgccttggatcaaca
attgtttatgctaattttaatcgtatcatcatctgtacgaagaagagacgcattgtagac
gctattgcgtatgttgagtacatcacaaatagtattaagagtagagaattattccatagt
gtggatatctcatttcaacagtgttgggaacatttagtatggcttgatccagctaactat
ggtgcaattaaggggaaattacctaagtcagttggagatgatgatgtcaaacctaatgat
gaggaggaaaatgatgaactggaattaaagttgaatgaagatgaagaagaagaagaggac
gagtatgaagttgagatgaattggaatataatgcattaccttccacaagctggagcctgc
cagactaattttaacatgattattgcaggttatattttagccgtttaccaacattctaaa
gaagaacaacaacaccacacaccaggtaatacacctatacgtaaacgaggaaatactcag
actcaaaaatcttcagatacaacagctacaccaagtacggtcaactttgctcaagacctt
gttgcaggggaattatctcagcagctatttggaatcacactgaagattcagaagaaagta
tcaggtaatcgtagtaaccatggcaatgcagctgatgaatttccccagttaccaggctcc
catctgcctttaaataatcctgctttggagtttatcaaagccatctgtaaggtattatcc
ttggataccaacataaccattcaagttgctaaactaaacagggatttattgaaattaatc
agcgttggtgagtttagcgaggattccaactggcgtgatccatgcttgtcgtatgtctta
cctgaggttatatgtaaaacttgtaatcattgtagagatttggatctctgtcgggatccc
ttgcttctacaagatgaaaacacagctgctgtgtggcagtgtgtgcagtgtaagagtgac
tatgatgttaatgaaatagaaagactacttatagaagctgtacagaggctatcaatggca
tatgtactacaagatgtcacatgttccaaatgtaatatgataaaagccctcaatatgtcg
gctcattgtgaatgtgctggtgattttgatgttaccatggcgatatcaaagtttgctgag
aagatgaaagttttcagaaacattgctatggtctctcttttcaacaacaaaagtaacatt
tataaaggtaaattcgtgcatgttagaattgaaacatttgatgataatggccgtgaaaga
aatcgaggtggtgacttcttttcagcagtcatgtcgaatgaagacttccagaaaagtaca
gctgggcgtattgttgactacgcaaatggaacatattctgtattcttctatgcagcctgg
tcagggaatgcgaacataacagttgctttgacattcaccagagaggcaatcaactttctt
agacatgttatcaaatcaaaggaagagatgaccaagtttactggtagatatcgagatggc
acttcacagaacataagtcagtgtacacttataaatgaaggcatatggcagaataagtgt
gaatatattaatcgaaactctttaggaaaaactacattgatctgcaataaacctacaaat
gttggttgtgaaaaactggaatacataaaggccagtgttgaatcactgaataaagttaca
gctgaaaagattaaagattttgaatatttgtataaaaaacgttatcacttgtcacagtta
catgcgacaccacttatgataaatattaaagaaaattcatcaacacttgaaccaatggtg
ccgtgtggtcccgatctaccagtgccattatcagatggatactgggaaaaccacaaagtg
tttgttcccttggtatgcagcagtacacagtggtcagatgatgatgtgcgaaagtgctta
tcgaacacggtggtattagagagtggtgattccaatttacgacagtttaaatggtttttt
gctaaattttatgatattaagtttcaacactattttgtgtcaccgcggactggcaacgta
gtagatcatttctggtcgtcagttctggaaagtgacttgttagatcacatcgaaactgac
acgtgtcactccagaaaacatatcgtgattctgaacttctcattccactttggtttgtgg
tctatgcgttcatatgttgaacggatattccatgcaaagctagccgtggaaagattgctt
aatcgatgtccgaatgtcaatgttgtgattaaattatcacatccacgtgataatatgtac
actgaacaaaacgtccatagcagtaattgggtgttctatgatcaaaacagagtcattcga
tatgtatttgctggaattggtgtcatctttcttgatgtatgggacatggtagtatcctct
gttgaacgtaatacagttcatatgcctcaacatgtcatacgtcaacaggtgtatctattg
ctctcgtacatttgtcctgaaatggtaaattga

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