Saccoglossus kowalevskii (acorn worm): 100367781
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Entry
100367781 CDS
T04123
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54-like
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sko03016
]
100367781
Transfer RNA biogenesis [BR:
sko03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
100367781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_end_N2
CDC73_N
ExsD_M
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
100367781
NCBI-ProteinID:
XP_002739332
LinkDB
All DBs
Position
Un
AA seq
650 aa
AA seq
DB search
MKMSDNRECKRDHNQNSGDENKKMGEPERRIKPNVQRLSGRELLNMKKMDSRLPTRGVKD
FAPDNSPWQQQRLDSAYAEQKNLLSEERVTRHGSLAQATWNGGLGLAELTLEKGKFWNTM
GHHINDKKWLLPEEALFLMNGGSLELYCNGVPLSIQEAYSILIPEYVPIEYYQVYSHLQR
LGYIVIRHQGTQFTSYEIQIRLDQYQVRNKQIQKKIEFWQQASEYNKPVASECRKSKSSL
GHKTSSYSPVSFPSFASPVVREEILSSVSECSDGSHDIVQKKHEEIRHSEINLLSYKQNQ
ERMAAMKAKFGNKKHRKPKQHSSEHNSSYRVEARHSAKLNMPSHSSMVKESESTESTDNS
FDNVMDEINIDNVLEVFCDLANEQVTHGGKRLISNQAAEYMGNTAVCSNIQFPNIADNCP
MNEFLIVKPGLLPQSIEAASKEKHRPNVAQFVKLQHLIQMTAEASRITDSMMNTSHQHCD
TLNSILQQEIGDCLRKASNWSEFKELEHQQKKKLNKSKRKSLWPDDSIQPLVMPSDAVNT
SNILDKLGIIKNVNVDCNRKRPRLDKSLPIQIAFDVYLPDSGYKKTNPGIPHLKICVVSS
SDAWPTLNVISRLLHECQGVPLLWAVLDNADISFHIFHDVNLPRSINGNT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcgacaacagagaatgtaaacgagaccataatcagaactcaggtgatgag
aacaagaagatgggcgaaccagaacgacgaataaaaccaaatgttcagcgattgagtggt
cgcgaacttttgaacatgaagaagatggattcacgtttaccaacacgaggagtaaaagat
tttgcgcctgacaactcaccatggcaacaacaacgtttagattcggcatatgctgaacag
aaaaatctactgtctgaagaacgagttacaaggcatggaagtcttgctcaagccacatgg
aatggtggtctaggactagctgagcttaccctggagaagggtaaattttggaatactatg
ggacatcacatcaatgacaagaagtggctgcttcctgaggaagcattgtttcttatgaac
gggggttccttagagttgtactgcaatggggttcctctatccatacaagaagcttactcc
atattgattcctgagtacgtaccaatagaatattaccaggtttacagtcatttacagcga
cttggatacatagtaatacgacatcaagggacccagttcaccagttatgaaattcaaatc
agattagatcaataccaggtgcgaaataagcagatacagaagaagatagaattctggcag
caagcttctgaatataataaacctgttgcctcagaatgtagaaaatcaaagtcatctctc
ggtcacaaaacgagttcctactcaccagttagcttcccaagtttcgcgtctcctgtagtc
cgtgaagagatcctttcatcagtttctgaatgttccgatggatcacatgatattgtgcaa
aaaaaacatgaagagatccgccattctgaaatcaacttgttgtcttataaacaaaaccag
gaacgaatggcggccatgaaggctaaatttggtaataaaaaacatcgcaaaccgaagcag
cacagtagcgaacataattcaagttatcgagttgaagctcgtcactctgctaagttaaat
atgccttcacatagttccatggttaaagagtctgaatcgaccgaatccactgataattct
tttgataatgtcatggatgagataaatattgataatgtactggaagtattttgtgattta
gctaatgaacaagtgacacacggtggtaagcgtttgattagcaaccaggcggcggaatat
atgggaaatacggccgtttgtagtaatatccaattcccgaatattgcggataactgtcca
atgaatgagttcctgattgtgaaacctggccttttaccacagagtatagaagctgctagt
aaggagaaacatcgtccaaatgtcgcacaatttgtcaaactacaacacctcatccagatg
actgctgaggcatcaagaattactgattcgatgatgaatacatcgcatcaacactgcgat
accctgaatagcatcctgcaacaagagattggggattgtctcaggaaagcatcaaactgg
tctgaatttaaggagctagaacatcaacagaaaaagaaacttaataaaagtaaaagaaaa
tccctatggcctgatgattctattcagccactggtcatgccttcagatgcagtcaataca
tcaaatatccttgacaaattgggtattataaagaatgtgaatgttgattgtaacagaaaa
agaccaagattggataaatctttacccatacagattgcatttgatgtttatttaccagat
tctgggtacaaaaagacgaacccaggaatacctcatctaaaaatttgtgtagtcagttct
tcagatgcatggcccacactgaatgtcatcagtagattgctacatgaatgtcaaggagta
ccactactgtgggctgtattggataacgctgatatctctttccacatattccatgatgtt
aatttaccaaggtctatcaatggcaacacctga
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