KEGG   Saccoglossus kowalevskii (acorn worm): 100367837
Entry
100367837         CDS       T04123                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
sko  Saccoglossus kowalevskii (acorn worm)
Pathway
sko03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sko00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100367837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sko03019]
    100367837
Messenger RNA biogenesis [BR:sko03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100367837
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_VPS8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT140_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st B-prop_COPA_B_2nd Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_LRRK2 WDR54 Beta-prop_NWD2_C VPS8_N Cytochrom_D1 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 100367837
NCBI-ProteinID: XP_002737336
UniProt: A0ABM0GU07
LinkDB
Position
Un
AA seq 427 aa
MGDATLRNREQMYRMVISQLLYDGYETLAVNLGKTVNTSLDCPPSNKLMRITQLGLQLDS
EHQETRSVIDTVAPGIGIDLEFDTDVQTIAPEAALYETCYVTAHKGPCRAAAWNRDGNLV
ATGSDDASIKVLDVERMLAKSATPAAILASETAQQNMENHPVIRTLYDHIEEVTCLDFHP
SIQILASGSKDYSVKLFDFSKPSVKRAFKSIQEAETVRCLSFHPSGDFLLVGTQHPTLRL
YDVNTCQCYVASNPDEQHTAPVTAVQFCPNANIYASCSKDGTIKIWDGVSNKCVNTFKNA
HDGNEVCSVTFARNSKYLLSSGKDSLVKLWEISTSRSLITYTGAGSGKQNHRTQAVFNHS
EDYVLFPDEKTTSLCCWDSRNAERQKLLSLGHNNVVRCIVHSPTSPGFITCSDDFRARFW
YRRSNTD
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgggtgatgcaactctgcggaatcgggaacaaatgtataggatggtgatcagtcagctg
ttatatgatggttatgaaacactggctgtaaatcttggtaaaacagtgaatacaagtctg
gattgtccaccttctaataaactaatgagaataacacagcttggattgcaattagattct
gaacatcaagagactcgcagtgtaatagatacagttgccccaggtatcgggattgatttg
gaatttgatacagatgtgcaaacaatagctccagaagctgctctgtatgagacgtgctat
gtgacagcacataaggggccttgtagggcagctgcatggaacagagatggtaatctagtc
gctaccggttctgatgatgcttctattaaagtattggatgtagagagaatgcttgcgaag
agtgctacaccggcggccattttagccagcgagactgcccaacaaaacatggagaaccac
ccggttattcgaactctgtatgaccacattgaggaagtcacttgtttggatttccatccc
agtattcagattttagcatcaggaagtaaagattactccgtcaaattgtttgatttctcc
aaaccatctgtcaagcgagcgtttaaaagtatacaggaagcggagactgtgagatgtcta
tcattccatccttccggggacttccttttggttggaactcagcatcccacattacgcctg
tatgatgtgaacacatgtcagtgctatgtagcaagtaatcctgatgaacaacatactgcg
cctgttactgctgttcaattctgcccaaatgccaatatatacgcttcatgtagcaaagac
ggcactattaaaatctgggatggtgttagtaataaatgcgtcaatacttttaagaatgca
catgacggtaatgaagtatgctcagtgacctttgccagaaattcaaagtatttgttgtca
agtggtaaagattcccttgtgaaactatgggagatatcaacgagtcgtagtttgatcacg
tacacaggtgcaggatctggtaaacagaatcacagaacacaagctgtgttcaatcattct
gaagattatgttctgtttcctgatgaaaaaacaactagtttatgttgttgggattccagg
aatgctgagagacaaaaactcctttcacttggtcataataatgtagtacgctgtatagtt
cattcacctaccagtcctggtttcatcacgtgtagcgacgatttcagagcaaggttctgg
taccgacgatcaaacactgattag

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