Saccoglossus kowalevskii (acorn worm): 100368015
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Entry
100368015 CDS
T04123
Name
(RefSeq) nucleoporin p54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100368015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sko03019
]
100368015
Messenger RNA biogenesis [BR:
sko03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100368015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Vps52_CC
Motif
Other DBs
NCBI-GeneID:
100368015
NCBI-ProteinID:
XP_002731520
UniProt:
A0ABM0GJZ1
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MSFSFGSASFGGQPPATSAPAFGGFGSSALTTGTTGFSGFGATKTTAPSLFGGLGTVTTA
TTAPSGSFSFQGFGAGTGTTGLGTGLGTGALGTGLTTTTTGGTGFGTGLGFGTGFGSSAT
GLGTGLGTGFGTSLGTGLGTGLGTGLGTGLGTGLGTGLSSGFGTTGLGATGLGTTGLGTT
GLGTGIQGQQANSANVLVNTASALHLPMIFGDERDIVFAKWNQIQAFWGTGKGYYTQNAS
VDFSPDNPFCRFKTVGYSCKPSTKNELGLVALDFKKKESEIRSYQQQIVDNLFKLLGSKP
TLSVCVEGVRALPDDRTEVLIYLLERLPTGTSKRVSATDLFSFLSQPTIKQQLVNLGVDN
MMPKTELTEAQLRQYMDNPPAGYDPRLWRQAKLDNPDPSNLIPVPMVGFSELNSRFKHQE
QQNKQHQGRLNIIAEDISTLQRNQSTIHAKLAEYKRKQAELSHRVLQVMLVQEVYRKSGL
AIQIDEEQLRVQLESIQAELNAPTQFKGRLNEMMSQIRMQSQALGARTEERYSMDLALQD
EIKQHLRQQQEGIRHLISIIKDDADDLQLIEQGLTEVIHRRR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcctttggtagcgcatcgtttggtggccaaccaccagcaacatcggctccg
gcgtttggagggtttggaagcagtgcgttgactacaggaactactggcttctctggattt
ggtgcaactaaaacaacagcaccctctctcttcggtggacttggaactgttactacagcc
acaacagcgccctcaggatccttttctttccaaggttttggagctggaactggaaccact
gggttgggaactggtcttggtacaggagcattaggtactggattaacaactactaccaca
gggggtactggatttggaactggattaggctttgggactggatttgggtcttctgcgaca
ggattaggtactggtctcggaaccggatttggtaccagcttaggaactggacttggcact
ggacttggcactggactagggactggattagggactggacttggcactgggttgtcatct
ggatttggtactactggactgggtgccactggtcttggtactactggtctgggcacaact
ggacttggtacaggcattcaaggccagcaagccaactctgccaatgtgcttgtaaacaca
gccagtgcgctacacttgcctatgatatttggtgatgaaagagacattgtttttgccaaa
tggaatcagatccaagcattttggggaactggtaaaggctattacacccagaatgcatct
gttgacttctcacctgataaccctttttgcaggtttaagacagttgggtacagctgtaaa
ccatccacaaagaatgagttgggtctagtggcattggatttcaagaagaaagaatcagaa
atacgaagttaccagcaacaaattgttgacaacttgtttaagttactgggaagcaaacct
acattgtctgtctgcgttgaaggtgtgagggcgctgccagatgatcgaactgaagtcctt
atctatcttcttgagcgtctaccgaccggtacatcaaagagagtgtctgctactgatctg
tttagttttttatctcagccaaccatcaagcagcaacttgttaatctaggtgttgataat
atgatgcctaaaactgaattaacagaagctcagttacgacagtacatggacaacccaccg
gcaggttatgatccacgattatggagacaagcaaaacttgacaatcctgacccatcaaat
ttaattccagttcccatggttggattcagtgaattgaattcaagatttaaacatcaggag
caacaaaataaacaacaccaaggtagactgaatataattgcagaagacatttctactctt
caaagaaatcaatccacaatacatgctaagttagcggagtataaacgaaaacaagctgaa
ctttcacatagagttttgcaggttatgctagtacaagaagtttacagaaaaagtggtctt
gctatacaaattgatgaggaacaacttagagtacaattagagtcaatacaggctgaatta
aatgcacccactcagttcaagggtcgtctcaatgaaatgatgtctcagattcgaatgcaa
agccaagctctaggagcccgaactgaagaaagatactcaatggatcttgctttgcaagat
gaaatcaaacagcatttaagacaacaacaagaaggcattcggcatcttatcagcattata
aaagatgatgcagatgacttacagttgatagaacaaggactaacagaagtcattcacaga
agacgataa
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