Saccoglossus kowalevskii (acorn worm): 100368326
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Entry
100368326 CDS
T04123
Name
(RefSeq) LOW QUALITY PROTEIN: 3'-5' exoribonuclease HELZ2-like
Organism
sko
Saccoglossus kowalevskii (acorn worm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
AAA_11
AAA_12
AAA_30
AAA_19
OB_HELZ2
DEAD
AAA_16
UvrD-helicase
ResIII
AAA_29
AAA_22
PhoH
nSTAND3
AAA
AAA_7
nSTAND_NTPase5
T2SSE
RNA_helicase
AAA_23
NPHP3_N
SLFN-g3_helicase
AAA_25
RsgA_GTPase
Terminase_6N
RMI1_C
CATSPERB_2nd
OB_Dis3
Motif
Other DBs
NCBI-GeneID:
100368326
NCBI-ProteinID:
XP_077865008
LinkDB
All DBs
Position
Unknown
AA seq
2565 aa
AA seq
DB search
MTNYYIKYILFLALTLGQLEDIVTISRNTVDNITPQHSDKPDDGDPNITLDRISKHETAV
HTVPSIFCAICPSKKFSSYRHLDAHRRSIEHRRRQHIDSDRFWCYRPPPWGVDNISELQL
CPNIGDTDVNTVLCPYAHSDDELREWKDRVHYRHIKKLKENGNSKSVYLGGILTAIQRSV
DLHSVIKEDLFDVIVNTTTPDLVELNESARNCDTFMHTFSFTITSKEKRLFKVGLLLDPC
RQFFTFADDSGNPIKDEVIDGDLIIGENGEYKINVQFSSTNEGVYHQWVICDFGERPLLV
KRLAVHAGEIHLTEDDVDVKSVFIDYFNDPISHGCHTSNGQDVVPVAQHEYPYYKFQMLS
WWDYQSFRVGDFSESSYSHFNEQRRQLCLKEMVLFNHILRCEFSGRATLRHGGDNVAVHL
DQNPLIGDVANLYSTVDDRHFKTVMETATMPSDTQQEGYIYGYNLDKIQTKVLLTICSER
ITGPCSPLMVLGPTGSGKTTVIDIAAAILLEQRSEFLVVILFLSAQPTIVTHSMDLLNLL
LCSISKARNKFYVIAYPGRPDCYKTERSTVLHSIMMDCNNKHSLEYSARNQDLLDNLLEI
DSHNLSELFKPTWSIIANEMVSLYNASDTDYTCNEDTDDFSLETHFLQGTTELNERLSDD
CDYSYFSDDDFNDYSGYISDEFHSDPLIPVPEKSVFPTMKTXLFKELPKHDLEEHLKVQP
EKYKRCRLETQMQEQDRVTPLDEEPDFEIRIPNKLKRGRALDQDTVVIELMDENRNEILE
MGDDKVDTKIKYGKVVGILERHEEPRMKKIACMLGEHSDNLLVPINGNFPKMSWLKGQLW
KETNKHAVCLPIYRITRFLNFELDHIEEVTTSERSQKIFIARFLHWNVNRRYPLCVAVDV
LPMGNTLENGLNILKAKYDVKDNSTTLEPSVESHCVRRDLFATPTFTIDPNDARDLDDAL
SLETLENGNFRIGVHIADVASYIPVDSSVDIAARKRGTSYYLPDKHPIHMLPRWLSEGTC
SLQPNTEKNALSHLFEVNTAGHVLSQYIIQTKIKPVHQLSYEEAERIITSGNIQDEFHEI
SSQLVSLNELAQKMRRQRLGMAHFLTEYGSYGEEPHTTPFAQQLVEEMMIMTNTEVAKML
VAKYPSCTPLRRQLKPQKKHFEQWLDSFDSVMKCSINISSKPSISANNVNGEFVIMDKFI
KQEGYIYGYNLDKIQTKVLLTICSERITGPCSPLMVLGPTGSGKTTVIDIAAAILLEQRI
RKYRKHIILISTNTVSCARVHLENIVKYVKKYPCQNIIRLLLPKGVSMSEIGEPLQKYSF
TWQESQEQCNTNWRIVITTTNNCHSLLTRGMANRFTHVFIDEADQAAYQSIIPSLALTSS
SGKIIIVGDLAQQLESKVGSCTVGDKSAMILFLRHYSIKQLFLKRIYRFTEGIRRFVNTH
MYPDINIVGNVESSTKDEIIPIHAIIPLVKVKEPSLKEIDTYQMLEITYRVEQLYRDWPE
EWGEFNEKNAHSDGSIKTLKQVTFEDQNFPQLFLMAVHFYGIQEKAEYVCSDPDKTKPHF
TLNCPVYVRCTSPIRRYMDLVIQRMVIAAIYGDESPYNKEEIVKMCTMCNQTEDKQKCFE
SDCRALKFALKVHNTPLKAMAVVETANDSSIDLQILRIRSIPSSERKIPLSLMKISTQPK
YDEATESLRLSWLEHIYDSKLGENNTVKPTTPNNTTIQLQRMRHTFATSTETWYNFIMSV
LHGNQHNSRRLITQLEQERRKCNRENAVTHDISSERIDKKGNRIDPCCFTRNFRMSDVLE
LQIGAHYSRGMLSPNIESVKLSEDFSICIEHRKDAVGCFSVNAEKKMPSLRNRHGWDINN
YQNRWITILSMSAAESAVRHNENIFIKSLSVTWSVSSQGEYIGTFFLPSNFCESRHITFH
SSIGDQGHDYICVKCQQFSVKKRSTPKFTNGDTLFFDNNFCWIAHCIVSRVQVEKKDGSE
DGTTIVDIKLKSTSVNILEQCLTSEQSSVEQICTVEIIKKSIPDRRVEDTVRMLRESSEF
VQQIALGHPPKRQIPRQQSLRRLVMKVSTNKREGLPSLNEDQFHAIKMSLENKFTVVQGP
PGTGKSYMAANLANAFVLSNRDEPSMKGGRILYCAPSNKAVDVAADYLTRFDMNIIRMYS
KSMEGKDYPVPGLTDITQYKRGNNAESSPALDDIALHRVIRKAPSKYGNEIRQFDSRFRN
AAIPSSKKDIEDYKALIKKAEKDALIGCDVILCTCSEAASKRLDKLCILQCIIDEAGMCT
EPETLVPLVRANPEQVVLIGDHRQLQPIVTHNLSNQMGLGVSLLERYCDQNHFIRLKIQY
RMHNAICEFPNNQFYDGDLETAETVLKRSQLKTTMDGVWPGGKHVPTVFCHSVGKEESLK
VTTDEGSEHSKKNLQEVKDVVRIAKILTTKYGLAKSRIQILSQYRAQCHEITGELKGVNC
QNIGVNSVIGFQGSEQDYIILSTVRSLPQREIEERPTKGWLKKNLGFVTDEHQINVALTR
ARKGLIIIGNANLLRTDYNWRRLLEEYRRKNCCVDARNFPSSKLY
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgactaattattatattaaatatatattatttctagctctcactttaggacagcttgaa
gacatagttacaatatcgcgtaataccgtcgacaatataactccacagcattcagataag
cctgatgacggtgatccaaatattaccctagacagaatatcaaaacatgaaaccgctgtt
catacagttcccagcatattctgtgccatctgtccatcaaagaagttcagctcctatcgg
catctcgatgcccatcgtagatcgatagaacatcgtcgacgtcaacacattgatagtgat
agattctggtgttatcggccaccaccctggggagtcgacaatatatcagagttacagtta
tgtccaaatattggtgacacagatgttaacacagtgttatgtccttatgcacattccgat
gatgaactgagagagtggaaagacagagtacattacagacacattaagaaattgaaggaa
aacggaaactccaaatcagtatacttaggaggaatattgactgccatacaacgatccgtc
gacttacacagtgtgataaaagaagatttgtttgatgtaattgtgaatacaacaaccccg
gatttagttgagttgaacgagagtgccagaaactgtgacacatttatgcataccttttcg
tttactataacatcgaaggagaaacgattattcaaggttggtttgctgttggacccttgt
agacagtttttcacttttgctgatgattctggcaacccaattaaagatgaagtcattgat
ggcgatttgatcataggcgagaatggcgagtacaaaatcaacgttcaattctcttcaaca
aatgagggtgtttaccatcagtgggttatttgtgactttggcgagcgtcccctccttgta
aaacgacttgcagttcatgcaggggaaatccacctcacagaagacgacgttgatgtaaag
tctgtgttcatagactacttcaatgaccccatctctcatggatgtcatacttcaaatgga
caagatgtggtacctgttgcacaacatgaatatccatactacaaattccaaatgctatct
tggtgggattatcagtctttcagagtaggagatttttctgaatcatcatattcccacttc
aatgaacaacgtcgacaactgtgcttgaaagagatggttctgttcaaccacatattaaga
tgtgaattttcaggccgagcgacactcaggcatggaggtgacaatgtcgcagttcacctt
gatcaaaatcctttgattggggatgttgccaatctgtactcgacagtggatgatagacac
tttaaaacagtcatggaaacagcaacaatgccatctgatactcaacaggaaggttacatt
tatggatacaatcttgacaagattcaaaccaaagttttactcacaatttgctctgagagg
ataacaggtccttgctcaccactgatggtactcggccccacaggcagcgggaaaactact
gtcattgatattgctgcagctattctattagaacaacgaagtgagtttttagttgttata
ctttttctctctgctcaaccaacaattgttacgcacagtatggacctgcttaacttacta
ctctgttcaatttccaaggcgcggaataagttctatgttattgcatatcctggccgacca
gactgttataagactgagagatcaacagttttacattctataatgatggattgtaataac
aagcactcattggaatattcagcccgaaaccaggatctgcttgataacctgttggaaata
gattcacacaatctaagtgaattgtttaaaccaacatggagtataattgcaaatgaaatg
gtgtcactgtacaatgcatcagacacagattatacatgtaatgaagatacagacgatttc
agtctagaaacccatttcttacaaggaacaacagaattaaatgagcgattatctgatgat
tgtgactacagctatttttcagatgacgatttcaatgattattcagggtacatttctgat
gagttccattctgatcctctgatccctgtcccagagaagagtgttttcccaacaatgaag
atgttatttaaggaattgccaaaacatgatcttgaagagcacctcaaagttcagcctgag
aagtataagcgatgtcgactggaaactcagatgcaagaacaagatagagttacaccactt
gacgaagaacctgatttcgaaattcgcattcccaacaagcttaagcgaggacgagctttg
gatcaagatactgttgttattgagctaatggacgaaaacaggaatgaaatacttgaaatg
ggcgatgacaaagttgacacaaagataaaatatgggaaggtagttggtatcttggagcgt
cacgaagaaccaagaatgaagaagatagcatgtatgctgggtgagcatagtgacaatctt
ttagtccctatcaatggaaattttcccaagatgagttggctcaaaggacaactgtggaaa
gaaacaaacaagcatgctgtctgtctaccaatatacagaattacaagattcctaaacttt
gagctagaccatattgaagaagtaacaaccagtgaaagatcacagaaaatatttattgca
cgattcctccattggaatgtaaacaggagatacccactgtgtgttgctgtagatgttctt
ccaatgggaaacactcttgaaaatggactaaacattctcaaagcaaaatatgatgttaaa
gataatagcaccactcttgaaccaagtgttgagagccattgtgttagaagagatttattt
gctacacctactttcactattgacccaaatgatgcacgagatctagatgacgctctgagt
ctagagactttagaaaatggtaatttcaggataggtgttcacattgcagatgtggcatca
tatattccagttgactccagtgttgatattgctgctcgaaaaagaggtacttcatactat
ctgccagacaaacatcccattcatatgctccctcgatggttgagtgaagggacttgcagt
cttcaaccaaatactgagaagaatgcattatcacacttgtttgaagtgaatacagctggt
catgtattatcacaatacatcattcagacaaaaatcaaaccagttcatcaattatcttat
gaagaggctgagagaataataacgtctggtaacatacaggatgagttccatgaaattagc
tcacaacttgtctctttgaatgaattagcacagaagatgagaagacaaagacttggtatg
gcacacttccttacagagtatggaagttacggggaagaacctcacaccaccccttttgcc
caacaacttgtagaggaaatgatgattatgacaaacacagaggtggctaagatgctagtg
gcaaagtacccgtcatgtacacctttaaggcgccaactcaaacctcaaaagaaacacttt
gagcagtggttggattcatttgacagtgtcatgaaatgtagcatcaatatttcatcaaaa
ccatctatatccgcaaataatgttaatggtgagtttgttattatggacaagttcatcaaa
caggaaggttacatttatggatacaatcttgacaagattcaaaccaaagttttactcaca
atttgctctgagaggataacaggtccttgctcaccactgatggtactcggccccacaggc
agcgggaaaactactgtcattgatattgctgcagctattctattagaacaacgcattaga
aagtatcgaaagcatataattctgatatccactaacacagtcagttgtgccagggtacac
cttgaaaatatcgttaaatatgtaaagaaatatccctgtcagaatatcatacggttgttg
ctgcccaaaggtgtttccatgtctgagattggagaacctctccaaaaatattcatttact
tggcaagagtctcaagaacaatgtaatacaaactggcgtatagttataacaaccactaat
aactgtcactcccttctgacacgtggtatggctaacagattcacacatgtgtttattgat
gaagctgatcaagcagcctaccaatccatcattccttctcttgctttgacaagttcaagt
ggaaaaatcattattgttggagacttggcacagcaattggagagtaaggttggatcatgt
acagttggtgacaagtcagcgatgattttgtttctccgccattactctattaagcaacta
tttcttaagcgtatatatagatttacagaaggcatcagacgatttgtgaacacacatatg
taccctgatatcaacattgttggaaatgtggaatcttcaactaaagacgaaataataccc
atacacgcaattatacctctagttaaagtcaaagaaccatctttgaaggaaatcgataca
tatcagatgctggaaatcacttacagagttgaacagctttatcgtgactggcctgaagag
tggggagaattcaatgaaaaaaacgctcacagtgatgggtccattaaaacactaaaacag
gtaacttttgaagatcagaatttcccacaacttttcctgatggctgtacatttctatgga
attcaagagaaggcagaatatgtatgttcagatcctgataagacgaaaccacattttaca
ctcaactgtcccgtatatgtaagatgcacatcaccaatacggcgatatatggaccttgtg
attcaaagaatggtaatagcagccatatatggcgatgagtcaccgtacaacaaggaagaa
atagtgaagatgtgcaccatgtgtaaccaaactgaagacaaacagaaatgttttgagagt
gactgtagagcattgaagtttgcattgaaggtacataatacacctttaaaggcaatggca
gttgttgaaacggctaatgacagttctatagatctgcaaatcctgcgaataagaagcatc
ccatcatctgagcgaaaaatcccactaagcctgatgaaaatatccacacaaccaaaatat
gatgaagctacagaatcgttgaggttatcttggttagagcatatttatgattctaaactt
ggtgaaaataatactgtcaaaccaaccacaccaaataacacaacaattcaattgcaacga
atgcggcacactttcgcaacctctactgaaacgtggtacaactttattatgagcgttttg
catgggaatcaacataatagtcgtaggcttattactcagctggaacaagaaagaagaaaa
tgtaacagggaaaatgctgttacccatgacatatcctcggaaagaatagacaagaaagga
aatagaattgacccatgctgctttacaagaaattttcgaatgagtgatgtattggagttg
cagatcggtgcccactatagtcgtggaatgttgagtccaaatatagagtctgtgaagcta
tcagaggattttagtatttgtattgaacatcgtaaagacgctgttggttgtttcagtgtg
aatgcagagaagaaaatgccatctctcagaaaccgacatggttgggacattaacaattat
cagaatagatggattacaatactctctatgtctgctgctgagtctgctgtacgtcataat
gaaaatatcttcatcaagtctttgtcagttacatggtctgtatcatcacagggggagtat
attggcactttctttttaccaagtaacttctgcgaaagtagacatatcacttttcactca
tcaattggtgaccaagggcatgattacatttgtgtaaaatgtcaacaattctcagtcaaa
aaaagaagtactcctaagttcactaatggagacacacttttttttgacaacaacttctgt
tggattgctcactgtattgtatcacgagtgcaagtggagaaaaaagatggcagtgaagat
ggaaccaccatagttgatattaaactaaaatccacatcagtgaatatcttagaacaatgt
cttacaagtgagcagtcttcagtggagcaaatatgtactgtggagattattaagaagtca
ataccagataggagagttgaagatactgttcgaatgcttcgtgaatcaagtgaatttgta
caacagattgctcttggacatccaccaaagcgtcaaattcccagacaacaaagcctacga
cggttagtcatgaaagtgtctaccaacaaaagagaaggccttccaagtcttaacgaggac
cagtttcatgctatcaaaatgtcattggaaaacaaattcacagttgttcagggaccgcca
ggaactggcaaatcatacatggcagccaatctcgccaatgctttcgtattgtcaaatcga
gatgaaccatcaatgaaaggaggacgtattctctactgtgctccttctaataaagccgtt
gatgtcgcagcagattaccttacacggtttgatatgaatatcatccgtatgtacagtaag
agcatggaggggaaagactaccctgttccaggattgaccgatattacacaatacaaaaga
ggaaataatgccgaaagtagtccggctcttgacgacattgccttacacagagtgatcaga
aaagcaccatctaaatatggtaatgaaataagacaattcgacagccgattcagaaatgct
gcaattccctcatcaaagaaagatattgaggattacaaggctctcattaagaaggcagag
aaagatgcactaataggatgtgacgtcatactttgcacatgctcagaagcagccagtaag
agattggataaactttgtattctgcagtgcatcatagatgaagcaggtatgtgcacagag
ccggaaactttggttccactggtgagagcaaatcccgaacaggtcgtccttattggagat
catcgtcaactacaaccgatagttacacacaatttatcaaatcaaatgggactaggagtg
tctttgttagagcgttactgcgatcaaaatcacttcataagactgaaaatacagtacaga
atgcataatgccatatgtgaatttccaaacaaccagttctatgatggagatcttgagaca
gctgaaacagtcttgaaaagatcacagttaaaaactacaatggacggcgtatggccaggg
ggaaaacacgtcccaactgtattctgtcattctgtggggaaggaggaatccctgaaagta
actaccgacgaaggaagtgagcactcaaagaaaaacttacaggaagtgaaagatgttgtt
cgcatagcaaagatactgactacgaagtacggacttgcaaagtcacggatacagatccta
tcccagtatcgagctcagtgtcacgaaattacaggagaactgaagggagtcaactgtcaa
aacattggcgttaattccgtgattggttttcaaggaagcgaacaagattatatcatactt
tctacagttcgttctttaccgcaacgggaaattgaggagcgaccaacaaaggggtggctg
aaaaagaatttgggctttgtaacagatgaacatcaaatcaacgtggctcttacacgggcc
aggaagggacttataattataggtaatgcaaacttgctgcgaacagactacaactggcgt
agattacttgaagaatacagacggaagaattgctgcgttgatgcacgaaattttccgtca
tctaaactttattga
DBGET
integrated database retrieval system
